Gene Mlab_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1278 
Symbol 
ID4794880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1305951 
End bp1307213 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content50% 
IMG OID640099961 
Productaminotransferase class-III 
Protein accessionYP_001030714 
Protein GI124486098 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.429678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGTTT ATACGAATAT CATCATTTTT CTTATATTGC TGATTTGTTC GGCATTTTTT 
TCGGCTTCCG AAGTCGCTCT TGTAGGTATC AGCCGTGCAA AAGTTCATAC ACTTTCAGAA
ACAGGAAGCC GCGGCAGGCG TCTGGATAAA TTAAAAAATA ATCCGGATCA TTTTCTGATC
ACGATCCTGA TCGGAAACAA TATCGCAAAC GTCGGGGCCG CATCTCTTGC GACCGCCGTT
GCTTTGGAAT TATTCCAGAA TAACGGCGTC GCGATCGCGA CGGGAGTTGT CACCCTTCTG
CTGCTGATAT TTGGGGAGAT AGGTCCAAAA ACCTACGCCA ATCGTCAGAT GGAGCGGGTC
GCACTGTTCG TTGCAACACC GATTTATTTC CTTACCATGC TCCTCTCGCC GCTCTTCTAT
GTCTATGACC GGTTCCGGAA GAAGGATCAT TCACCGTCCG TAACTGAAGA AGAGATCCGT
GAATGGATCG ATGTCGGAGA GATGGAAGGG GCGATTGAAG AGGAAGAGAA GGAGATGATC
TACTCGGTTC TCAAATTCAA CGACACGACT GCAAAGGAGA TCATGACGCC GAGGCCCGAT
GTTGCGGTTG TTGAGGATAC GGTAACACTT GAAGAAGCGG TATCCCATTT CAGGGAAACC
GGTTTTTCGC GTGTACCGGT CTATCATGAC AAAACCGACA ATATTGTCGG AACCCTCAAC
TTCAAGGATC TCTTTAATGC CTACTCGACG GATAACCGCA AGGCCTCGGT CAAGAGCCTG
ATGCTTGACG TTTACTGCGT GCCTGAATCG AAAAAGATCG ATGTTCTTCT TCGTGAACTT
CAGGTCAGGC GTGTTCATAT GGCGATCGTT CTGGACGAGT TCGGCGGATT TTCCGGTGTC
GTGACCTTCG AGGACATTCT CGAGGAACTC GTCGGCGATA TCATGGATGA ATCCGACGGG
GATGAAGTCT CGGATATCAT CCCGATCGGC GACGGTCTGT ATATGATCGA TGCCCAGGTC
CGTGTGGCCC TGCTGAATGA ACGGTTTGAT ATTTCACTGC CCGAAGATCC GGGTAATTAC
GAAACGATCG GCGGCCTCGT CTTCTCGCAG TTGGGTCATA TCCCTCGTCT CGGAGAGTCG
ATCCCGCTCC CGGGAGATCA TATTACCCTC GTTGTTACCA AGATGCGGGG TAGACAGATC
CTTAAAGTCA AGATGATTCT CGCCGCCCCT GAATATGACG ATCAGGATAT AAGCGGGGAG
TAA
 
Protein sequence
MVVYTNIIIF LILLICSAFF SASEVALVGI SRAKVHTLSE TGSRGRRLDK LKNNPDHFLI 
TILIGNNIAN VGAASLATAV ALELFQNNGV AIATGVVTLL LLIFGEIGPK TYANRQMERV
ALFVATPIYF LTMLLSPLFY VYDRFRKKDH SPSVTEEEIR EWIDVGEMEG AIEEEEKEMI
YSVLKFNDTT AKEIMTPRPD VAVVEDTVTL EEAVSHFRET GFSRVPVYHD KTDNIVGTLN
FKDLFNAYST DNRKASVKSL MLDVYCVPES KKIDVLLREL QVRRVHMAIV LDEFGGFSGV
VTFEDILEEL VGDIMDESDG DEVSDIIPIG DGLYMIDAQV RVALLNERFD ISLPEDPGNY
ETIGGLVFSQ LGHIPRLGES IPLPGDHITL VVTKMRGRQI LKVKMILAAP EYDDQDISGE