Gene Mlab_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1257 
Symbol 
ID4795638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1284102 
End bp1286021 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content54% 
IMG OID640099937 
Producthypothetical protein 
Protein accessionYP_001030693 
Protein GI124486077 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCCA TGAATCATGG ACCAAGCGGC GGCAAGCGTC CCGGGATTCC CGTTGTCGGA 
AACAAACCCA ATGATGTGAA AAAGACGCTG AAACGTCTTC TTTCCTATCT GCCGGGTATG
TACAAGGTAA CGCTCGGCGC CGTCGTCGTT TGTATTATCC TCAGCACTCT TGCCGGCGTG
ATTGGTTCGC TTTTCCTGGA AGTGCTGATC GATGACTACA TCACCCCGCT TATCGGTGTG
GAAAATCCGG TGTTCACCGG GCTTCTCCAG GCCATCCTCT TCATGGCGGT CATCTTCCTC
TGCGGTGTTG TTTCGACCCT TATCTATAGC AGACTGATGG TCATCATTTC CCAGGGGGTC
ATGAAACGGA TCCGTGACGA CATGTTTGTC CATATGCAGA AGTTACCCAT CCGGTACTTC
GACACGCATA AGTTCGGCGA CACGATGAGC CATTACACAA ATGATACCGA AACGCTGCAT
CAGATGCTTT CACAGAGCGT TCCCCAGGTG TTTTCATCGA TAATCACCAT CATCTTCGTC
TTCTGCGCCA TGATCTATAC GAGTGGTCCT TTGACGCTCC TCGTTGTGGT CATGGTGTTC
GTGCTGTTCT TCGTGATGAA GAATGTCGGG GGAAAGAGTG CGGTGTATTT TGTCCGTCAG
CAGAAGTCGC TTGGAACCGT GAACGGGTAT ATCGAGGAGA TGATCAACGG GCAGAAGGTC
GTCAAGGTTT TCTGTCACGA GGATCAGGTC AAAGCCGAGT TCGATGTGAT GAACGATGAA
CTGCGCGGAC ATGCGAAGTC GGCAAACACC TTTGCCAATA TTTTCATGCC GATCGTCATG
AATCTTGGAA ATATCCAGTA TGTTCTGGTG GCCGTCGTCG GCGGTGCGCT CGCGATCGGC
GGGGTCGGCG GTTTGACCCT TGGAGGGATC GCGGCCTTCC TCCAGCTGAG CAGAAGTTTC
ATGATGCCGG TCAGTCAGGT TTCCCAGCAG ATGAGTTCGG TTGTCATGGC CCTTGCCGGC
GCAGAACGGA TCTTCAAACT GCTGGACGAA CCGGAAGAGG AGGATACGGG AGATGTCACG
CTCGTTAATG CGCAGTATGA AGGATCGGTC CTCACCGAGG CTCCGGCATT TACGGGCATC
TGGGCATGGA AGGAGATCGT TGACGGCTCT CCGGTCTATA CAAAACTGGA AGGGGATGTG
CAGCTCCGCG ATGTAAGCTT TGGCTATACG CCGGACAAGG AGGTCCTGCA TGACGTTTCC
GTGTATGCAA ACCCGGGTCA GAAGGTGGCG TTCGTCGGAG CGACGGGTGC CGGGAAAACG
ACGATCACCA ATCTGATCAA CCGGTTTTAC GATGTGCAGG AAGGCGAGAT ATTCTACGAC
GGCATCGATG TGAAGCGGAT CAGAAAAGCC GATCTTAGGC ATTCGCTTGG GATCGTGCTG
CAGGATACGA ATCTGTTTAC GGGAACGGTC AGGGAAAACA TCAGGTACGG GAAGCTGGAT
GCGACGGATG AGGAGGTGTA TGCGGCGGCA CGTCTCGCAA ACGCTCATGA CTTCATCACG
AGACTTCCCG AAGGATACGA TACGATTCTG GAAGGAGACG GCGGAAGCCT TTCCCAGGGT
CAGCGGCAGC TTTTATCCAT CGCACGGGCT GCGGTGGCAA ATCCTCCGGT GATGATCCTG
GATGAGGCGA CGTCGAGTAT CGATACGAGA ACGGAGGCGA TCGTCCAGGC AGGTATGGAT
TCTCTGATGA AGGGACGTAC GGTCTTTGTG ATCGCTCACC GTCTTTCGAC GGTGCATAAT
GCGGACGTGA TCATGGTTCT CGAGTCGGGA CGGATCATCG AACGCGGGAC GCATACGAAG
CTTATCTCCG AGAAAGGTAA GTACCATCAG CTGTATACGG GCGCATTCGA GCTGGAATAA
 
Protein sequence
MPPMNHGPSG GKRPGIPVVG NKPNDVKKTL KRLLSYLPGM YKVTLGAVVV CIILSTLAGV 
IGSLFLEVLI DDYITPLIGV ENPVFTGLLQ AILFMAVIFL CGVVSTLIYS RLMVIISQGV
MKRIRDDMFV HMQKLPIRYF DTHKFGDTMS HYTNDTETLH QMLSQSVPQV FSSIITIIFV
FCAMIYTSGP LTLLVVVMVF VLFFVMKNVG GKSAVYFVRQ QKSLGTVNGY IEEMINGQKV
VKVFCHEDQV KAEFDVMNDE LRGHAKSANT FANIFMPIVM NLGNIQYVLV AVVGGALAIG
GVGGLTLGGI AAFLQLSRSF MMPVSQVSQQ MSSVVMALAG AERIFKLLDE PEEEDTGDVT
LVNAQYEGSV LTEAPAFTGI WAWKEIVDGS PVYTKLEGDV QLRDVSFGYT PDKEVLHDVS
VYANPGQKVA FVGATGAGKT TITNLINRFY DVQEGEIFYD GIDVKRIRKA DLRHSLGIVL
QDTNLFTGTV RENIRYGKLD ATDEEVYAAA RLANAHDFIT RLPEGYDTIL EGDGGSLSQG
QRQLLSIARA AVANPPVMIL DEATSSIDTR TEAIVQAGMD SLMKGRTVFV IAHRLSTVHN
ADVIMVLESG RIIERGTHTK LISEKGKYHQ LYTGAFELE