Gene Mlab_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1254 
Symbol 
ID4794704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1280256 
End bp1280867 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content50% 
IMG OID640099933 
Producthypothetical protein 
Protein accessionYP_001030690 
Protein GI124486074 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATCAC AATGGACAAA AGATAATGTA TATAGAAAAG CGATGCGGGA CGGGTATAGG 
GCCCGCTCAG CATACAAACT CATCGATATC AATGAACGAT TCAATGTAAT CAGACAAACG
GACAACGTGG TTGATCTCGG GGCGGCCCCC GGAAGCTGGC TTCAGGTCTT AAAAACGATG
ACCGAAGGTC AGCTCTGCGG GGTTGATCTC AATCCGATCA TTCCACTCGA AAACGTCATC
ACGATCACCG GCGATTTTAC CGATCCTGCC ATTCAGGCAA AAATCAGGGA GGCCATGCCT
CTGGTAAATG TCGTGGTATG TGATGCATCC CCCCACCTTT CCGGAGCGAA AGCCTATGAT
CAGGCACGGG TCATGGGGCT CAACGAAGAG GCGCTGAACT TTGCAAGCAA CCTCTTAAAA
CAGGGCGGCA ATCTGGTCAT GAAATCTTTT CAGGGCTCCG ACTTCAACGA ACTTCTTGCC
CTCGTTAAGG AAAAGTTCTA CTCGGTCAGG GTGATTCGAT CAACAGCTAC CCGGAGAGGA
AGTACCGAAT GCTACATCGT TGCAAAGAAT TTCATAGGAG ATGCCGATGA CGACAGAAAA
AAACGCGAGT GA
 
Protein sequence
MGSQWTKDNV YRKAMRDGYR ARSAYKLIDI NERFNVIRQT DNVVDLGAAP GSWLQVLKTM 
TEGQLCGVDL NPIIPLENVI TITGDFTDPA IQAKIREAMP LVNVVVCDAS PHLSGAKAYD
QARVMGLNEE ALNFASNLLK QGGNLVMKSF QGSDFNELLA LVKEKFYSVR VIRSTATRRG
STECYIVAKN FIGDADDDRK KRE