Gene Mlab_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1253 
Symbol 
ID4794814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1279408 
End bp1280151 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content50% 
IMG OID640099932 
ProductDNA polymerase sliding clamp 
Protein accessionYP_001030689 
Protein GI124486073 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00590] proliferating cell nuclear antigen (pcna) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAG CAACCATTGA AGCAGATATT TTCCGTGAGA CCATCGATGC GGTTTCAGCA 
CTGGTAAACG AATGCCGTCT TCACGTTGAC GAGAAGGGAA TCAGAACGAT CACTGTGGAT
ACTTCCAACG TGGCAATGGT TTCCTTAGAA CTCTCTGCAT CGGCGTTTCT CACATTCGCC
GCAGAACCCT GTGAAATAGG TCTCGATATT GAAAAGATCA GATCGATGAT GTCGATGATC
GGCAAGACGG ACATCGTCTC TCTCGAACTT GACGAATCGG GCAAAAAACT CAAAATCAGT
TTCGGCGGGT ATGAATATTC GATAACCCTG CTTGATACAA AGACCATCAG AAAAGACCCG
AACGCGCCGA ACCTGAATCT GCCCGCAACC TTTGAAGTTC CCGGCGTAAT GTTCAATGAT
GCCATCAAGG CTTCCTCAAT GGTTTCCGAT AAGATCTCCC TTGCCGTGTC TGCGGAGACC
TGCGTTTTTA CCATGAATGC CGACGGTGAT TCCGACCGGA TCAAACGCGA ACTTACCGGC
GATGATGTGC ATTACCTCAC CTGTGCGGAT GCGAGATCCC TTTTCTCTCT TGACTATCTC
AAAGACATGG GCAAATCGAT CGGCCGTGCC GAGAAGGTCC AGATCCGTCT GGGCACCGAT
CACCCGGTCC AGTTCTCCTT CGTCTATGCA GGCGGCAAGG GAAGTGTGGG CTACCTTCTT
GCGCCGAGGA TCGAGGCAGA TTAA
 
Protein sequence
MLKATIEADI FRETIDAVSA LVNECRLHVD EKGIRTITVD TSNVAMVSLE LSASAFLTFA 
AEPCEIGLDI EKIRSMMSMI GKTDIVSLEL DESGKKLKIS FGGYEYSITL LDTKTIRKDP
NAPNLNLPAT FEVPGVMFND AIKASSMVSD KISLAVSAET CVFTMNADGD SDRIKRELTG
DDVHYLTCAD ARSLFSLDYL KDMGKSIGRA EKVQIRLGTD HPVQFSFVYA GGKGSVGYLL
APRIEAD