| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1242 |
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| Symbol | rpl13p |
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| ID | 4795844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanocorpusculum labreanum Z |
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| Kingdom | Archaea |
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| Replicon accession | NC_008942 |
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| Strand | - |
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| Start bp | 1270726 |
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| End bp | 1271148 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640099920 |
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| Product | 50S ribosomal protein L13P |
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| Protein accession | YP_001030678 |
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| Protein GI | 124486062 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01077] ribosomal protein L13, archaeal/eukaryotic |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0012994 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.58635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAACAG TTATTGATGG AGAAAATCTC CTTCTTGGAA GACTTTCCAG TATTGTTGCA
ACCCGCATCC TCGCCGGTGA GGAGATTGCA ATCATCAATG CCGAGAAGGT CATCGTATCC
GGCGCTCGTG CAATGGTCTT AAACGAATAC CAGGTAAAGC GTGTTCGCGG ATCCGTCGAA
GGAGGTCCGT TCCTTCCAAG ACGCCCGGAC CACCTGGTAA AACGCACCAT CCGCGGTATG
ATCCCCTACA AGACACGGCC GGGAGCAGCA GCTTTCCGCC GCGTCAAGGC ATACGTCGGA
GTTCCTTACG AACTCAAAGA CGTCGAGGCG GAAGTTCTGG AAGATGCTCA CCGCAGCCGG
CTGAGCGGCG CCAGATACAT CTCTGTTGGT GAGATCAGCA AAAACCTTGG AGCAAAATTC
TAA
|
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| Protein sequence | MVTVIDGENL LLGRLSSIVA TRILAGEEIA IINAEKVIVS GARAMVLNEY QVKRVRGSVE
GGPFLPRRPD HLVKRTIRGM IPYKTRPGAA AFRRVKAYVG VPYELKDVEA EVLEDAHRSR
LSGARYISVG EISKNLGAKF
|
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