| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1208 |
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| Symbol | |
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| ID | 4794523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanocorpusculum labreanum Z |
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| Kingdom | Archaea |
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| Replicon accession | NC_008942 |
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| Strand | + |
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| Start bp | 1238389 |
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| End bp | 1240014 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640099882 |
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| Product | helicase c2 |
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| Protein accession | YP_001030644 |
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| Protein GI | 124486028 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain |
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| TIGRFAM ID | [TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.852242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0992609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGT TCGACGCACG AAAACGCGAC GGAAACGCCC GGATCGGGAA CCTGAAACTC
TCCGACGAGG AAAGCATCAG CACGCCCGCC GTGATCGACG CAGAGTCGGT CTTCCCCTCG
CTTGAGGAAC GCGGATTCAC GAACCTCCCG CCGTCCGCTA GCAAAGCCGA GTTCGGGAAA
TACTTCGTCG CAGGCGAAGA GCCGACGGCC GTTCACCCGC AGAGCGAGTC CGTCGAGGGA
AGCGTGCTCC TGTTTTCGAA CTGGAACACC GTCATCTCCG ACGCACGCCG CCATGCCGAG
TATATGGAAA AACTGCTCGC GGTCTGTCCC CCGGACGCCG CACGCTATGC CCCCGCATGC
GGTCTTCCCT CGAACGTAGC TTCGCTGATC TACCTCGGAT TCGACCTCTT CGACTACACC
GCGGTGGATC TTGCGGCAGT CCAGAAAAAG TTCTGCACGC CCGAAGGCGA GTTCGATGCC
TCCTACATGG AAAAAGGCAT CTGCGATTGT CCGGGCTGCA AAGCCGGCGA CCTGAAGCTC
CACAACCGCC TGGCTCTCGA AAAAGAGATC GCTCTCGCAC GGGTCTGGAT CGAACAGGGC
CAGCTCCGCG AGTTCATGGA GATGCGCTGC AGACTCCACG CCGAGCAGGT CTCTCTTCTC
AGACACGTCG ACAGGAGACC TGGCTTTGCG GTGAACCTGC CGGTCGTCCG GTCGTCCCGG
TTCCTCGCAA ACTCCTCCGA GTCGATGACC CGTGCCGAGA TCGCCTTCTT CGAGGATCGG
GTCATCAACC GGTTCGTTCC GGGAAGGACC GATGTCTGCG TCCTTCTTCC GTGCGCCGCA
CGAAAACCCT ACTCGCTCTC GAGATCGCAT CAGCTCTTCT CCCGCGTGGT CGACAGCCGT
GCCCATGAAG TGATCGTGAC TTCGCCCTTA GGCGTCGTCC CCCGCGAACT CGAACTCATC
TATCCGGCAG GCCACTACGA TGTGCCGGTG ACCGGATACT GGGACAAGGA AGAGTCCGCG
ATCCTGGTCG AATACCTCAC GGCCTATCTC ACGAAGCACC GGTATGACCG GGTCATCTGC
CATCTGGAAG GCGGGGCAAA AGAGGTCGCG AAGACCGCCG CACAGGCGGC CGGCGTCGAA
CTCGAGTTTA CCTGCAATGA CGACAAGCCG CTCTCCCCGG ATTCGCTCCG TGCCCTCAAC
AACGCCCTTC GCGAGAGCAG AAAACGCCGG ACGGATCCGA TCCGCGGCAC GCTTCTCTGG
CAGTTCGGCG AACTGGTCGA CACGAAGGGC TGGCTTACGA AAGGCCGGTA TCCGAACCAG
AAGATCTACG AGAAGAAGAC GCAGATCTTC TCGATCGACC CGGAGACGGG CCTGCTCCGC
CCGACCCACG AGGGGTGGAA GTACATCAAC GGCTACCGGG TCTGGATCTC GGACGGCTTT
GTCCCGCAAG GAGATATCCT TGCGCCGGGT ATCGCCGACT GCGATCCGCA GATCCGTGAA
GGCGACGAGG TGTTCGTCGG CGGCGAAGGA TATCAGGCGA CCGGAAAAAC CACGATGGGT
GCGGACGAGA TGCTCCGTGC CAACCGCGGT ATCGCGGTCC GCGTGCGGAA GACGAATCGA
AAATGA
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| Protein sequence | MSLFDARKRD GNARIGNLKL SDEESISTPA VIDAESVFPS LEERGFTNLP PSASKAEFGK
YFVAGEEPTA VHPQSESVEG SVLLFSNWNT VISDARRHAE YMEKLLAVCP PDAARYAPAC
GLPSNVASLI YLGFDLFDYT AVDLAAVQKK FCTPEGEFDA SYMEKGICDC PGCKAGDLKL
HNRLALEKEI ALARVWIEQG QLREFMEMRC RLHAEQVSLL RHVDRRPGFA VNLPVVRSSR
FLANSSESMT RAEIAFFEDR VINRFVPGRT DVCVLLPCAA RKPYSLSRSH QLFSRVVDSR
AHEVIVTSPL GVVPRELELI YPAGHYDVPV TGYWDKEESA ILVEYLTAYL TKHRYDRVIC
HLEGGAKEVA KTAAQAAGVE LEFTCNDDKP LSPDSLRALN NALRESRKRR TDPIRGTLLW
QFGELVDTKG WLTKGRYPNQ KIYEKKTQIF SIDPETGLLR PTHEGWKYIN GYRVWISDGF
VPQGDILAPG IADCDPQIRE GDEVFVGGEG YQATGKTTMG ADEMLRANRG IAVRVRKTNR
K
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