Gene Mlab_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1183 
Symbol 
ID4794561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1207929 
End bp1208987 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content43% 
IMG OID640099856 
Producthypothetical protein 
Protein accessionYP_001030619 
Protein GI124486003 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.401368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0474441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAT CACATAGCAC CAAGTTAATT GCAATTGATT TTTTTTGTGG CGGGGGCGGA 
ATTACCAAAG GGTTGTCCGA TGCCGGGATT AAAGTACTGG GAGGTATCGA CATCTCGCCC
GATTTAAAGA GAACGTATGA AGAAAATAAT CATAATAAAT TCGTAAATTT TGATATTCGA
ACGATCTCCG GTAGTAATAT ATACAAAGAA TTTCCTGAAA TCGAGGGAGA TGAAGATAAT
TTGCTTCTTG CCGGCTGTGC TCCGTGCCAA CCCTTCAGTA AACAGCGTAG AGCAAATACC
GAACACGTCG ATAAGGATTT GCTCACGGAA TTCGGACGTA TAGTAAAAGA TGTATTGCCC
GCTCACCTTC TTATAGAAAA TGTTCCGGGA TTGATGAAAA AGGGTCATTC AGTTCTCGAA
AATTTCTTAA AAATACTGGA TGAGTGCAAC TACTCATACG ACTACAAAGT AGTTAATGCA
AATGACTACG GCGTTCCTCA AAAAAGAAAA CGATTGGTTA TTATTGCATC TCGATTCTTC
ATCCCAAAGA TTCCCGATGG AGAATATGGT CCGAATAATT CCGGTAAAAA ACCATATGTG
ACCGTAAGAG ATGCTATTCT TTGCTATCCG CCAATACAGG CAGGAGAATC GGCAGATAGC
GTGCCAAATC ATTCAGCCGC ATGCCTTAAC GACAAAAACT TGACGCGTAT TCGGGCAACT
CCTCACGATG GAGGGGATAG ACGAGCTTGG TCATCCGAAT TAGTCCTCGA TTGTCATAAA
GGAAAAACCG GTCATACGGA TGTATACGGA CGAATGGCAT GGGATGACGT TGCCCCGACG
CTTACGAGCC GCTGTGCGAG CCTTTCAAAC GGGAGATACG GTCATCCGGA ACAAGACAGG
GCAATTTCTC TGCGTGAAGC AGCCGCACTT CAAACATTTC CAGACGACTA TATTTTTTAC
GGCAACAATG TATCCATTGG AAAACAGATC GGAAATGCCG TTCCCGTAAA ACTCGCCGAG
GTATTCGGGG AATATATCCT TAGTAACAGT AAAAAATAA
 
Protein sequence
MDKSHSTKLI AIDFFCGGGG ITKGLSDAGI KVLGGIDISP DLKRTYEENN HNKFVNFDIR 
TISGSNIYKE FPEIEGDEDN LLLAGCAPCQ PFSKQRRANT EHVDKDLLTE FGRIVKDVLP
AHLLIENVPG LMKKGHSVLE NFLKILDECN YSYDYKVVNA NDYGVPQKRK RLVIIASRFF
IPKIPDGEYG PNNSGKKPYV TVRDAILCYP PIQAGESADS VPNHSAACLN DKNLTRIRAT
PHDGGDRRAW SSELVLDCHK GKTGHTDVYG RMAWDDVAPT LTSRCASLSN GRYGHPEQDR
AISLREAAAL QTFPDDYIFY GNNVSIGKQI GNAVPVKLAE VFGEYILSNS KK