| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1180 |
|---|
| Symbol | |
|---|
| ID | 4795026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1204007 |
|---|
| End bp | 1204462 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640099853 |
|---|
| Product | T/G mismatch-specific endonuclease |
|---|
| Protein accession | YP_001030616 |
|---|
| Protein GI | 124486000 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
|---|
| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.209463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.125774 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGAG TAACTCCCGA ACACCGTAGT TGGATGATGA GTCGAGTTCG GTCAAAGAAA
ACTAAACCGG AACAACTCGT TGCTTCCTAT CTGAGGGAAT CTCATATCGG CTATCGACGA
TGTCGGACCG ATCTTCCGGG AAAACCGGAC TTCGTTCTTT CCAAATATCG AGCCGTCATT
TTTGTGAATG GATGTTTTTG GCATGGTCAT GCGGGGTGCA AACGTGCCAC CATTCCCAAA
ACGAATACGG AGTGGTGGAT TGCTAAATTT CAACAAAATA AATTACGCGA TGAGAGAAAT
TATGCACAGC TTCGGGAAAT GGGGTGGCGG GTTTTCGTAA TTTGGGAATG TGAACTTGGG
AACGATGTGG AATATAAACT CAAGGAATTA GTGAAGGAAA TGCTGCTTTG GGATGATTAT
CCTGCTGATG ACTATCCAGA CGAAATATTC TACTAA
|
|---|
| Protein sequence | MDRVTPEHRS WMMSRVRSKK TKPEQLVASY LRESHIGYRR CRTDLPGKPD FVLSKYRAVI
FVNGCFWHGH AGCKRATIPK TNTEWWIAKF QQNKLRDERN YAQLREMGWR VFVIWECELG
NDVEYKLKEL VKEMLLWDDY PADDYPDEIF Y
|
|---|
| |