Gene Mlab_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1173 
Symbol 
ID4794582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1195887 
End bp1196420 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content57% 
IMG OID640099846 
ProductXRE family transcriptional regulator 
Protein accessionYP_001030609 
Protein GI124485993 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID[TIGR00270] conserved hypothetical protein TIGR00270 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.359549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT ATATCATGCA GACAGAATAT TGTGAGTTAT GCGGGGTAGC ACTGAGTAAG 
AAAGGCAAAC TGGTGCAGAT CGAGGGAGCA AAGCCGATGA GAGTCTGCGA CAAGTGCGCC
AAGCTTGGGA CCGAGGTCCA GGCACCGCGT GCTCCGGTCC AGTCGTTCGG CCGCCCGGTC
ATTACGACCA AGGCCAAGTC GCCGTCCCAG GCCAGTCAGC AGGCGAACCG CAAGCGGGAT
ATGTTCGATT TCATCGAGGG CGATATCGTG GAGGATTACC CCCAGCGGAT CGCATCGGCC
CGTCTTGCCA AAGGCTATAC CCAGAAGGAT CTTGCCTTCA TTTTGAAGAT GCAGGAAGGA
GACATCAAGA AGTTCGAACG CGGCGAGCGT GCCCCGACAG AGGCAGAACG CAAGAAGCTC
GAAAAGGAGC TCGGCATCGT TCTTCTGGAT GTGTCCGATG ACGACGACAA GCTTCAGGCA
GGCGGCGTCG CATCCACCAC GCTCGGCGAT GTTCTTCAGG TGAAGAGGAA GTAA
 
Protein sequence
MSEYIMQTEY CELCGVALSK KGKLVQIEGA KPMRVCDKCA KLGTEVQAPR APVQSFGRPV 
ITTKAKSPSQ ASQQANRKRD MFDFIEGDIV EDYPQRIASA RLAKGYTQKD LAFILKMQEG
DIKKFERGER APTEAERKKL EKELGIVLLD VSDDDDKLQA GGVASTTLGD VLQVKRK