Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1166 |
Symbol | |
ID | 4794798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | + |
Start bp | 1186762 |
End bp | 1188153 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640099839 |
Product | ABC transporter releated protein |
Protein accession | YP_001030602 |
Protein GI | 124485986 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.403976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAT CCAGCAATAT CCTTACTGAA GGACCGGTCG GAAAAGCCCT TTTGATAGTG GCGCTTCCGA TTATCATCAG TAATCTTCTT CAAAGCGTGC TGGAAGTCGT GGACATGTAT TTCATCGGGA AACTGGGGGA TGTGTCCATC GCGGGCGGGA CCATGAGCAT TATGGTTTTA ATGGTCCTGA CCACGGTGAT TTTCGGCATC GTGACGGCCA CTGCCGCATT TGTTTCACGA GCCTACGGCT CGGAGAAGTT TGAACGTATT CAGGTCATCC TGCTTCATTC CCTGTATCTG GCGCTTGGGT TTTCCGCGAT CCTTGCAGTG ATAGGTTTGT TCTTTTCGGA GAATCTGCTT TTGCTGATGG GAGCGTATCC CGATGTCGCG GCAGAGGGGG CGAGGTTCCT TACGCCGATG CTTATGGGCC TCTTTGTAAT GGTGATCCTG ATTACGCTGA CGACGGTGTT CCAAAGTACG GGAGATTCAA GAACACCCAT GTATGTGATG CTTGGGGTCA ATGTAGTGAA TATTATCCTG AACCCGACCC TGATTATGGG TCTTGGGGGC CTGCCGGCAT GCGGGATCGC CGGTTCGGCG TATGCGTCGC TTCTCTCAAG AGCGATAGGC GTGATGCTTC TGATCGGCGT GATGTATCTT CTGCCGTCGA AGAAGAACAG TCCTATCAAG TTCCCGAAGA AGTGGACGTT CGAGCCGAAG CTGATCAAGG ACATCGTCGT GATCGCGATA CCGTCAGCAA TCCAGAGCGG TATTCGAAGC GTGGCGTTCC TCTCGATGAC GACGATCATC GCCGTGTACG GGACGGCCGC GGTGGCGGCA TACGGTATCT GCCTCAGGCT GGATATGATG GGCCTGATCA TCGTGATGGG ACTTTGTACG GGGGTCGCCG TGATGGTGGG TCAGAATCTC GGAGCGGGAA AAGTCGAGCG GGCGGTAAAA ACGGTCAGGT ATGCCGCGAC AGCCAATGCG GTATTCATGA TCGGTGTTGC GGCACTGTAT CTGGTCTTTG CGACGGAGTT CCTGAAGTTC TTCGGAGCGA CCGGAGAATC GCTTGCCGAC GGGACGATGT TTATGCAGAT CGTGCCGCTG TCCTACTTCC TCGTGGCGAT CGCCATGACC ATGGGTTTTG CAATGAACGG CGCCGGCATG ACGCGGCCGG GGATGTACTC GGCGATCGCC GGCCAGCTAA TCGTGCAGGT CGGTCTTGCC GCGTTCTTCG CCTTCAGCGG GTATTCTATC CAGTATATCT GGTATGCCGT CGTGTGCGGA ACGGTCGTGA TGTTCTGTTT CGATCTGTTC TTCTATATGC GCGGAGGCTG GAAGACGAAG AAGCTGAGAA TCGACAGCGA CGAAACGCCT GCAGAAAACT GA
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Protein sequence | MKESSNILTE GPVGKALLIV ALPIIISNLL QSVLEVVDMY FIGKLGDVSI AGGTMSIMVL MVLTTVIFGI VTATAAFVSR AYGSEKFERI QVILLHSLYL ALGFSAILAV IGLFFSENLL LLMGAYPDVA AEGARFLTPM LMGLFVMVIL ITLTTVFQST GDSRTPMYVM LGVNVVNIIL NPTLIMGLGG LPACGIAGSA YASLLSRAIG VMLLIGVMYL LPSKKNSPIK FPKKWTFEPK LIKDIVVIAI PSAIQSGIRS VAFLSMTTII AVYGTAAVAA YGICLRLDMM GLIIVMGLCT GVAVMVGQNL GAGKVERAVK TVRYAATANA VFMIGVAALY LVFATEFLKF FGATGESLAD GTMFMQIVPL SYFLVAIAMT MGFAMNGAGM TRPGMYSAIA GQLIVQVGLA AFFAFSGYSI QYIWYAVVCG TVVMFCFDLF FYMRGGWKTK KLRIDSDETP AEN
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