Gene Mlab_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1163 
Symbol 
ID4794929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1183909 
End bp1185459 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content55% 
IMG OID640099835 
ProductDNA-directed RNA polymerase subunit beta'' 
Protein accessionYP_001030599 
Protein GI124485983 
COG category[K] Transcription 
COG ID[COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.552918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA GAAGTGTATT ATCAGGCGCG TACTTTTCCC AGGAACACGT TGCACGCCAC 
CAGCTGGACT CCTATAACAA TTTTGTCCAG TTTAACCTCC AGAAAGTCGT AGACGAACAG
CGTATCGTCG AGACCGAAAT CGTCAACAGA GGAAAGAACC AGGAGGCCGT GTGGGTCGAA
CTGGGAAAAA TCCGTGTTGA AAAACCCATC GTCAGGGAAG CAGACGGTTC GCAGAGCAAG
CTCTATCCGG CCGAAGCCCG CCTAAGAAAC CTTTCCTATG CGGCCCCGAT GATCCTTGAA
ATGACCCTCC ACCAGGGAGA CAAAGTCTAT CCGGTCCAGG AAACGACCAT CGGTCAGCTC
CCGGTCATGA TCGGCAGTCA GGTCTGTAAC CTCTGCGGTC TGTCCCAGGA AGAGAGAACC
GAGCAGGGCG AGGATCCGAG CGATCCCGGA GGATACTTCA TCGTCAACGG AACCGAGCGT
GTATTAATGA CGCTCGAAGA TCTTGCCAGC AACAAGATCA TGACCGAGTT CACCGAGAGA
TACAACGAGC AGATCCATGT ATCCAAAGTG TTCTCCCAGT TCCGCGGCTA CCGCGCTCTC
GTCGTTGTCG AGAAGAACAA GAAGAACCTC CTCGACGTCT CCTTCCCGAG CGTTGCCGGC
CACCTGCGGT TTGCGGACCT CATGCGTGCG CTTGGTCTCG AGTCCGATGA AGAGATCGTA
TCGGCCGTCT CCCTCTCAGA AGACGTCCTC ACCTACATGA TGCAGAACCT CGAAGAAAGC
GAATGCGCCA CCGTCGAGGA GGGTGTCATG TATGTCGGTA AGAAGCTTGC GCCCAACCAG
ACCAAGGATT ACCAGAGAAA ACGCGCCGAG TTCGTTTTGG ACAGCTACCT TCTCCCGCAC
TTAAACTACG CCATCCCCGG CTCCTTAAAA CCCGGAGACG AAGGCTACGA AGTGTATGCA
AAGGATGTCC GGATCGCCAA AGCCGAATTC CTCGGCAGAA TGGCAGAGGC ATGTTTCGAC
CTCGCACTCA ACAAGAGGAG AATCGACGAC AAAGATCACT ACTCCAACAA GCGCCTGAAA
CTTGCAGGTG ACCTGATGGA GGATCTGTTC CGTATCTCGT TAAACAGACT TACCCGCGAT
GTCAAGTATC AGCTTGAACG CGCGAGCATG AGACACAGAG AACTCGCGAT CGGAACCGTC
GTCCGTGCGG ATGTCTTGAC CGAACGCCTG ATTCACCCGC TTGCAACCGG AAACTGGGTC
GGCGGAAGGA CTGGTGTCTC CCAGCTTATG GACCGCGTCG ACCACATGTC GGTCATTTCC
CACCTGCGAA GAGTTATCTC TCCGCTGTCC AGATCCCAGC CCCACTTCGA GGCCCGTGAT
CTGCACCCAA CCCAGTGGGG GCGCATCTGT CCGTCCGAAA CTCCGGAAGG ACCAAACTGC
GGTTTAGTGA AGAACTTTGC CCAGCTTGTC GAGATCAGTA AAGGAACCGA TGAGGACGAG
GTCCTCCGTG TAATACAGGG CATGAAGATC CAGCCGATCA GGAGCGAATA A
 
Protein sequence
MIDRSVLSGA YFSQEHVARH QLDSYNNFVQ FNLQKVVDEQ RIVETEIVNR GKNQEAVWVE 
LGKIRVEKPI VREADGSQSK LYPAEARLRN LSYAAPMILE MTLHQGDKVY PVQETTIGQL
PVMIGSQVCN LCGLSQEERT EQGEDPSDPG GYFIVNGTER VLMTLEDLAS NKIMTEFTER
YNEQIHVSKV FSQFRGYRAL VVVEKNKKNL LDVSFPSVAG HLRFADLMRA LGLESDEEIV
SAVSLSEDVL TYMMQNLEES ECATVEEGVM YVGKKLAPNQ TKDYQRKRAE FVLDSYLLPH
LNYAIPGSLK PGDEGYEVYA KDVRIAKAEF LGRMAEACFD LALNKRRIDD KDHYSNKRLK
LAGDLMEDLF RISLNRLTRD VKYQLERASM RHRELAIGTV VRADVLTERL IHPLATGNWV
GGRTGVSQLM DRVDHMSVIS HLRRVISPLS RSQPHFEARD LHPTQWGRIC PSETPEGPNC
GLVKNFAQLV EISKGTDEDE VLRVIQGMKI QPIRSE