Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1163 |
Symbol | |
ID | 4794929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 1183909 |
End bp | 1185459 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640099835 |
Product | DNA-directed RNA polymerase subunit beta'' |
Protein accession | YP_001030599 |
Protein GI | 124485983 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.552918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACA GAAGTGTATT ATCAGGCGCG TACTTTTCCC AGGAACACGT TGCACGCCAC CAGCTGGACT CCTATAACAA TTTTGTCCAG TTTAACCTCC AGAAAGTCGT AGACGAACAG CGTATCGTCG AGACCGAAAT CGTCAACAGA GGAAAGAACC AGGAGGCCGT GTGGGTCGAA CTGGGAAAAA TCCGTGTTGA AAAACCCATC GTCAGGGAAG CAGACGGTTC GCAGAGCAAG CTCTATCCGG CCGAAGCCCG CCTAAGAAAC CTTTCCTATG CGGCCCCGAT GATCCTTGAA ATGACCCTCC ACCAGGGAGA CAAAGTCTAT CCGGTCCAGG AAACGACCAT CGGTCAGCTC CCGGTCATGA TCGGCAGTCA GGTCTGTAAC CTCTGCGGTC TGTCCCAGGA AGAGAGAACC GAGCAGGGCG AGGATCCGAG CGATCCCGGA GGATACTTCA TCGTCAACGG AACCGAGCGT GTATTAATGA CGCTCGAAGA TCTTGCCAGC AACAAGATCA TGACCGAGTT CACCGAGAGA TACAACGAGC AGATCCATGT ATCCAAAGTG TTCTCCCAGT TCCGCGGCTA CCGCGCTCTC GTCGTTGTCG AGAAGAACAA GAAGAACCTC CTCGACGTCT CCTTCCCGAG CGTTGCCGGC CACCTGCGGT TTGCGGACCT CATGCGTGCG CTTGGTCTCG AGTCCGATGA AGAGATCGTA TCGGCCGTCT CCCTCTCAGA AGACGTCCTC ACCTACATGA TGCAGAACCT CGAAGAAAGC GAATGCGCCA CCGTCGAGGA GGGTGTCATG TATGTCGGTA AGAAGCTTGC GCCCAACCAG ACCAAGGATT ACCAGAGAAA ACGCGCCGAG TTCGTTTTGG ACAGCTACCT TCTCCCGCAC TTAAACTACG CCATCCCCGG CTCCTTAAAA CCCGGAGACG AAGGCTACGA AGTGTATGCA AAGGATGTCC GGATCGCCAA AGCCGAATTC CTCGGCAGAA TGGCAGAGGC ATGTTTCGAC CTCGCACTCA ACAAGAGGAG AATCGACGAC AAAGATCACT ACTCCAACAA GCGCCTGAAA CTTGCAGGTG ACCTGATGGA GGATCTGTTC CGTATCTCGT TAAACAGACT TACCCGCGAT GTCAAGTATC AGCTTGAACG CGCGAGCATG AGACACAGAG AACTCGCGAT CGGAACCGTC GTCCGTGCGG ATGTCTTGAC CGAACGCCTG ATTCACCCGC TTGCAACCGG AAACTGGGTC GGCGGAAGGA CTGGTGTCTC CCAGCTTATG GACCGCGTCG ACCACATGTC GGTCATTTCC CACCTGCGAA GAGTTATCTC TCCGCTGTCC AGATCCCAGC CCCACTTCGA GGCCCGTGAT CTGCACCCAA CCCAGTGGGG GCGCATCTGT CCGTCCGAAA CTCCGGAAGG ACCAAACTGC GGTTTAGTGA AGAACTTTGC CCAGCTTGTC GAGATCAGTA AAGGAACCGA TGAGGACGAG GTCCTCCGTG TAATACAGGG CATGAAGATC CAGCCGATCA GGAGCGAATA A
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Protein sequence | MIDRSVLSGA YFSQEHVARH QLDSYNNFVQ FNLQKVVDEQ RIVETEIVNR GKNQEAVWVE LGKIRVEKPI VREADGSQSK LYPAEARLRN LSYAAPMILE MTLHQGDKVY PVQETTIGQL PVMIGSQVCN LCGLSQEERT EQGEDPSDPG GYFIVNGTER VLMTLEDLAS NKIMTEFTER YNEQIHVSKV FSQFRGYRAL VVVEKNKKNL LDVSFPSVAG HLRFADLMRA LGLESDEEIV SAVSLSEDVL TYMMQNLEES ECATVEEGVM YVGKKLAPNQ TKDYQRKRAE FVLDSYLLPH LNYAIPGSLK PGDEGYEVYA KDVRIAKAEF LGRMAEACFD LALNKRRIDD KDHYSNKRLK LAGDLMEDLF RISLNRLTRD VKYQLERASM RHRELAIGTV VRADVLTERL IHPLATGNWV GGRTGVSQLM DRVDHMSVIS HLRRVISPLS RSQPHFEARD LHPTQWGRIC PSETPEGPNC GLVKNFAQLV EISKGTDEDE VLRVIQGMKI QPIRSE
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