Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1073 |
Symbol | |
ID | 4796142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | + |
Start bp | 1090385 |
End bp | 1092184 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640099744 |
Product | hypothetical protein |
Protein accession | YP_001030509 |
Protein GI | 124485893 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0310] ABC-type Co2+ transport system, permease component [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM [TIGR02454] cobalt ABC transporter, permease protein CbiQ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.842265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATATTA TGGAAGGGTT TCTGCCAAGC CCGTGGTGGC AGTTTTGGGC ACTCCTCGCT GTGGTTTGTG TTTTGGCAGG CATGGCCGCG CTTATCAGAC TCGTCAAGAG AAATCCTGAG TCACTGCCGC TTCTCGGACT TGCGGGAGCA TGTGTTTTTA TCCTTTCATC CCTGAAACTC CCTTCCGTAG GATCCTCATC GCATGCAACC GGCACGGGAT TTGGCGCGAT ACTATTCGGA CCTGCGGTGT GTTCAGTGTT CTGCACAATA GTATTAGTAT TTCAGGCACT TCTTCTTGCA CATGGAGGGA TCACCACACT TGGCGCAAAC ATCATCTCGA TGGGTGTTGC AGGCCCGCTT GCCGCCTGTA TTATTTTTAA AATCGGCCAT CTGATTCGAC CCGAATTTAG TATCAGGAGT TTTTCGGTCA CCGTGTTTTG TGCTGCTGCT GCGGCAGATT TAGTCACTTA CATGATGACC TCCCTTCAAC TCGCACTTGC CTACCCGGCG GCTGAAGGAG GGGTGCTTGC CTCTTTTGTG GTCTACCTTG GGATTTTCAG CATAACGCAG GTTCCCCTTG CTGTTCTTGA GGGCATACTC ATTGTTCTTA TGATGAGATT TGTGATCAGG ATACGCCCGG ATATCTTTGT CTCCCTCGAC ATTCTGTCGA AAAAAGAGAC ACGCATACTT CTTCCGAGTT CCGATCAGAA CTTATCCCCA ATATCGAAAA ACAAATGGAT TATTGCCGGA ATCATTGTCG TGCTGCTTAC AGCCTCCCTT GCATTCCTGC TTGCAGGACT CGGACTCCAG TCCGGATCTG ATGATCTGGT CGCAGAAACG CTGATAGATC TGGGAAATCT TCCGGTCTTT GATCCGCTGA ATCTTGTCTC CGAGGATATG CACGGCTGGC TGTTTGCTCT TCAGGCCGGT ATCGGGGCTG CAGTCCTTGT TTTCTGTCTC TATCTGCTGA GAATCAGATC GGCATCCCGA GGTTTTGGAA AAAAACCTCA CACCATCTTT GATGAACATA TTCTCGATGA TGTGGCGATC GCAAGTCCTC TTCGGCAGGT TTCAGCATGG CTTAAACTGC TGTTCTGTCT GTCAGCGATC ATAATCGGCG TGACCTCGCC GCTCCCGTAT CTCCCATTAT TTATTGCGGG GGTCATGATC TTTGCAGCAC TCATCATCGC GAAAGTCAGT CCGCGTCTTT ACGGATCTCT CCTGACGATC CCTCTGGTGT TTGCCGGAAC GGGAGCTGCG GTGATTTTAC TCATCACCGG CGGCGGGGAA ACACTTATCG ACTTTTTCCG TATCGGAGCA TTTCATTTCC AGATAACCAC GACTTCGCTT GAACTGGCGG CACTGGTATT ATCCAGGACG CTGGCAGGTA TGTGTTCGCT CTACTTCCTT ACTCTAACCA CGCCGATAAC ATCACTGTTT TCCGTTCTCC AGAAGATGCG GATGCCTCAG GCATTCATCG ATTTGTCCAT GCTGATTTAC CGGTATATCT TCGTCTTCAT CGGCGAGGCG ATCGCGATCC ACAATGCACA GATTATGCGG GGAGGATATG GCACGTGGAA AAATTATCTC ACTTCGTTTT CCATGCTTGC CTCGATGCTT TTTATCAGAA CCTGGGAAAA AGGAGAGGCA ATCTTTGTTT CCATGGACTC ACGCTGTTAT GACGGATGCA TGGCTCTTCC AGAAGAAGAG GGTCATGTCA CTCCGCTTTC AGCGATGGCT GTGTTTCTCT TTATTGCGTT AATATTTGGT CTGTTATGTG CGGAGATGCT GTTATTATGA
|
Protein sequence | MHIMEGFLPS PWWQFWALLA VVCVLAGMAA LIRLVKRNPE SLPLLGLAGA CVFILSSLKL PSVGSSSHAT GTGFGAILFG PAVCSVFCTI VLVFQALLLA HGGITTLGAN IISMGVAGPL AACIIFKIGH LIRPEFSIRS FSVTVFCAAA AADLVTYMMT SLQLALAYPA AEGGVLASFV VYLGIFSITQ VPLAVLEGIL IVLMMRFVIR IRPDIFVSLD ILSKKETRIL LPSSDQNLSP ISKNKWIIAG IIVVLLTASL AFLLAGLGLQ SGSDDLVAET LIDLGNLPVF DPLNLVSEDM HGWLFALQAG IGAAVLVFCL YLLRIRSASR GFGKKPHTIF DEHILDDVAI ASPLRQVSAW LKLLFCLSAI IIGVTSPLPY LPLFIAGVMI FAALIIAKVS PRLYGSLLTI PLVFAGTGAA VILLITGGGE TLIDFFRIGA FHFQITTTSL ELAALVLSRT LAGMCSLYFL TLTTPITSLF SVLQKMRMPQ AFIDLSMLIY RYIFVFIGEA IAIHNAQIMR GGYGTWKNYL TSFSMLASML FIRTWEKGEA IFVSMDSRCY DGCMALPEEE GHVTPLSAMA VFLFIALIFG LLCAEMLLL
|
| |