Gene Mlab_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1015 
Symbol 
ID4794522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1024624 
End bp1025262 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content51% 
IMG OID640099685 
Producthypothetical protein 
Protein accessionYP_001030451 
Protein GI124485835 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID[TIGR03634] proteasome endopeptidase complex, archaeal, beta subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.743194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAG AACACCAGGA CGTTAAAACG GGAACCACCA CAGTGGGTAT TGTATTCGAT 
GGCGGCGTCA TCCTTGCTAC CGAGAGGCGG GCAACGATGG GTAACTTGAT CGCCAGCAAG
AAAGCAAAGA AAGTACATGC CATCACTGAT AAGATCGGTA TGACAATCGC CGGTGGGGTT
GGGGATGCCC AGCAGCTTGT CAGAATCATC AATGTCGAAT GCAACCTCTA CGAGATCCGC
AGAGGTCAGA AGATCAGTGT CGGGGCGGCA GCAACGATCC TTTCCAATTA TCTGAACCAG
AATCGCTTTT CACCATACTA CGTTCAGCTT CTTGTCGGTG GTGTCGATAC CAGCGGTCCT
TCCGTATACT CCGTAGATGC GGCCGGCGGA GCAACGCTTG AAGAGAACTT TGTCTCGACG
GGATCTGGAT CGCTGACAGC CTACGGTGTC TTAGAGGATC GGTTCAAACC CAATATGACC
GAGGAGGAAG CAATCGAACT AGCCGTACGT GCACTTCGCG CAGCAATGCT TCGTGACTCG
GCTTCCGGAG AGGGATACAA TGTGGTGATA ATAACCCAGG AGAAGTTCGA ATATCTTCCT
GAGGATAAAA TAGCCGGGTA TCTGCCCCCG GCAAAATAA
 
Protein sequence
MSQEHQDVKT GTTTVGIVFD GGVILATERR ATMGNLIASK KAKKVHAITD KIGMTIAGGV 
GDAQQLVRII NVECNLYEIR RGQKISVGAA ATILSNYLNQ NRFSPYYVQL LVGGVDTSGP
SVYSVDAAGG ATLEENFVST GSGSLTAYGV LEDRFKPNMT EEEAIELAVR ALRAAMLRDS
ASGEGYNVVI ITQEKFEYLP EDKIAGYLPP AK