Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1012 |
Symbol | |
ID | 4795422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 1018367 |
End bp | 1021816 |
Gene Length | 3450 bp |
Protein Length | 1149 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640099682 |
Product | condensin subunit Smc |
Protein accession | YP_001030448 |
Protein GI | 124485832 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.750966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACATTG TCCAGGTTGA CATCGACAAC TTCAAGTCTT TTTCCAGAAA GACAAAAATT CCCTTTTATG AAGGATTTAC TGTAATATCC GGGCCGAACG GTTCGGGAAA AAGCAACATC ATCGACTCTA TCCTTTTCGT TCTATCTTTA TCCACCTCAC GCACCCTTCG CGCCGAAAAA CTCACGGATT TCATCAATAC CATGTCTGGA AAAAATACCG CCGAGGTCAC CCTCACCTTT TCGGACGAGA CAAAAATCCG CCGGAGGATC AAACGGACCG CAAACGGATA TTACAGTTAT TATTATCTCA ATGAAAAGAC CTGTTCCCAA ACCGAAATCC TGGAGTATCT TGCAAAACGC GGGATCAAGC CGCACGGATA CAATGTCGTG ATGCAGGGAG ATATCTCCCG CATCATGGAT ATGAGCGATC TGGAACGCAG ACGGATCATC GATGAGATCG CGGGGGTTGC GGAGTTCGAT GATAAAAAAG AACAGGCTCT CGTGGAACTC GAGCAGGTTC GCGCCAGTAT CGACCGCGAA GAGATCCTTC TTGCTTCATA CGCCAAACAA CTGGAGGAAC TCGCTGATGC CAGAGAAGAT GCGGTAAAAT ATCAGAAGCT TCAGGCGGAA CTCGATTATC TCAAAGCCGC AAAACAGATC GTCAGGCTTC AGGATCTTGA GCGCGAACTC GGGTTGATCG CCCATTCGAG GTCCGAGCAG GAAGAGAAAC GTGCAGGTAT CCGTAACGAC ATCTCTCTTC AGGAAAACGA GAAAAATTCC CGTCTCGAGG AAGTTCGCGA GATCGATAAG GAGATCAGTC ACAAACAGGG TCCCGCCTAT ATGCGGATCA TTGGGGGCAT TGAGGCAGAA AAAGGAAACA TCCGTGTTGC CGAGGAGACC ATCATCCGCA GGAAAAAAGA GAAAGAGAGC AACCTTGCCG AGATGAACCG CCTGTATCTC GATCTCCAGA AAAACCAGAA CACGCTCAAC GATAAGATCC GGGAATCACA GACGCTGCAG ATCGACAAAG CGAATCTGGC GATGGAACTC GAGGCCCAGA AAAAAACTCT CGAGAAAGCC CACGAGCTTG TCAGTAAATG CAGCCGGGAT TCAAAAGGGG CTCAGGCCGA ACTGGTCGAT CTTATGCGGC AGGTCGAGGA GAAAAAGGAG GTACGCGGTT CGATCGTCGT TCAAAGGGAT GGGATTATCG AACGGAGCCG TGTTCGGGCA CAGGAACTGG AAAAGCTTCA GAGGGAGCAG GGTTCTCTCG CGGAAGAACG TTCCGAGAAG CAGGCCGAGA TCGACTCGCT CGAACACGAT CTTTTGGATG CCAGGAAAAA CAAAGGGATC CTCGATAAAC AGATCGGCGA GACCGAGCGG GCGATGCTTG GCGCACGTAA AGCTCTGGAA CCTCTCAGAG AAGAAATCGC CAGGCTGACG AAAAAGCAGA TGCAGATCGA AGCCCAGCAG CAGGCATCCG GCGCTTCGGA CCGGACCATT TCGGCTATTC TTGGTATGGA CGGCGTATTT GGGACCGTTT CGAGTCTTGG AAAAGTGATC GACTCCGCAT ATGCCGTAGC GTTAAACATA GCGGCGGGCG GGCGGCTCAA CAACGTTGTT GTCGACTCCG ATCAGACTGC GGCAAATGTT ATCCGCTATC TGAAAGATGA ACGGCTTGGT CGCCTGACGC TTCTTCCGCT GAACAAGATG AAGCCTCAAC CTCCTCTTCC CCCGCTCGCC GGCAACGGGG TTGTGGATTA TGCGATCAAT TTGATCGACT TCGATCCGGA ATACCGGGAT GCTTTCAATT TAGTTTTTGG TCAGACGGTG GTCGTCGAGA CGCTGGATGC CGGCCGGCGG CTCATGGGAA GATACCGGAT GGTGACGTTG GAAGGCGAAC TTCTCGAAAG AGGCGGGGCC ATGACCGGCG GTTCGATCCG GAAAGATCTT CGCGGGTTCG GTGTTGCCGT CGGCCGCGAG TCTGCGGATA TTTCTGCAAA ACTTGCCGAT CTGCGTAATG ATGAATCCGA TCTTGTGGCA GCTGAAGCAC GCCACCGATC GGTTGCCGAA GGTCTTCGCG CCGAACGAAA CGAGTCTGAT TCGGCGATCG TTAAATTCGA ATTAAAAATC AGTGACTGTA ATCGGATCCT CGATAAGATC GCGGACGATG AGATTCGGGC ATCACGTCTT CTGGAAGAAA CGGATCGCGA TAAAAAAGAG ACGGCAAATC AGGTGGCCGA ACTCGAGACG CGTGTGGACG CTCTGTCCGA TGAACTCGAG GTCCTGAATC AGCGGGTGAG CGAACTGCGC TCTGTCCTGA ATGAGGATGA GTTCAATCTG CTCACCGATA AACTGCAGAA AGCCCAGTCG AGTTACAATG ATACGTCCCG CCGGTATGAG AACAAAGTGA ACGACCTTTC CGGTCTGAAT CTCGAACGTC AGCATTTCAA ACAAAATGTT GAGCAGATAA CCCGGGAGCG TACCACTCTG GAGGGAAAAA ATGTCTCGAT CGATCAGGAG ATTGCTGATT GTTATGCCGC GATCGATACG GCAAAATCCG CGATCACTGC GTTCGAGGAT GAGATGAAGG CTTTCACCGG TGAGATCGAA CAGCTGACCG AGGAACGGAA CAAAGCTCAG CATGCGGCGG ATGAAGCGCA GCTGCGGATC GTGACTTTGC AGGGTGACGA GGAGAGATGC AATGTGCAGA TCTCCGCATT TGATGAAAAA TCCGCCTCTC TTGCGTTGGA GATGTCCGAG ATCAAGGGTT CGATCAGTGA GGAAATCGTC TGCGATCTCT GCATGGACGA GATCCTCGAT CGCGTCGCAA CAACCGAGCG TGCCGTCAGA AAACTTGGCA ACGTGAATAT GCGTGCCATC GAGCAGTATG ATGAGGTCCA GAAACGTTCC ATTGAGCGGA CCGAAAAGAA GGAGACGCTT TCCCGCGAAC GTCAGGCACT TCTCGATAAG ATCGATAGTT TCAAGCAGAT GAAGTTTGAT GCGTTCATGA ATGCCTACTC GGCAATCAAC CTGCATTTCC AGGATATCTA CTCCCGTCTG AACGAAGGTG CCGGTCATCT GGTTCTGGAT GATATTGAGG ATCCTTTCCA AGGGGGCATG ACGTTTGAGG TCTCGCCGCG TGGAAAGGAA GTAACCCGGC TGAATATGAT GTCTGGGGGG GAGAAGTCTC TTACGACCCT TTCGTTTATT TTTGCGATCC AGCAGTACAT GCCGGCGCCC TTTTATGCGC TGGATGAGGT GGATTCCAAT CTGGACGGGG TGAATGTGGA GCGTTTGTCC CAGATGGTCC GCGATATCTG TACGAAAAGT CAGTTCGTGA TCGTTTCGCA CAGAAAACCG ATGATCGAAG CGGCGGACCG GATGGTGGGC GTGACTCTGC GTATGAGCGA TAAGAGTACG CTTGTGACTG GTGTGAAGGT GAATGGCTGA
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Protein sequence | MHIVQVDIDN FKSFSRKTKI PFYEGFTVIS GPNGSGKSNI IDSILFVLSL STSRTLRAEK LTDFINTMSG KNTAEVTLTF SDETKIRRRI KRTANGYYSY YYLNEKTCSQ TEILEYLAKR GIKPHGYNVV MQGDISRIMD MSDLERRRII DEIAGVAEFD DKKEQALVEL EQVRASIDRE EILLASYAKQ LEELADARED AVKYQKLQAE LDYLKAAKQI VRLQDLEREL GLIAHSRSEQ EEKRAGIRND ISLQENEKNS RLEEVREIDK EISHKQGPAY MRIIGGIEAE KGNIRVAEET IIRRKKEKES NLAEMNRLYL DLQKNQNTLN DKIRESQTLQ IDKANLAMEL EAQKKTLEKA HELVSKCSRD SKGAQAELVD LMRQVEEKKE VRGSIVVQRD GIIERSRVRA QELEKLQREQ GSLAEERSEK QAEIDSLEHD LLDARKNKGI LDKQIGETER AMLGARKALE PLREEIARLT KKQMQIEAQQ QASGASDRTI SAILGMDGVF GTVSSLGKVI DSAYAVALNI AAGGRLNNVV VDSDQTAANV IRYLKDERLG RLTLLPLNKM KPQPPLPPLA GNGVVDYAIN LIDFDPEYRD AFNLVFGQTV VVETLDAGRR LMGRYRMVTL EGELLERGGA MTGGSIRKDL RGFGVAVGRE SADISAKLAD LRNDESDLVA AEARHRSVAE GLRAERNESD SAIVKFELKI SDCNRILDKI ADDEIRASRL LEETDRDKKE TANQVAELET RVDALSDELE VLNQRVSELR SVLNEDEFNL LTDKLQKAQS SYNDTSRRYE NKVNDLSGLN LERQHFKQNV EQITRERTTL EGKNVSIDQE IADCYAAIDT AKSAITAFED EMKAFTGEIE QLTEERNKAQ HAADEAQLRI VTLQGDEERC NVQISAFDEK SASLALEMSE IKGSISEEIV CDLCMDEILD RVATTERAVR KLGNVNMRAI EQYDEVQKRS IERTEKKETL SRERQALLDK IDSFKQMKFD AFMNAYSAIN LHFQDIYSRL NEGAGHLVLD DIEDPFQGGM TFEVSPRGKE VTRLNMMSGG EKSLTTLSFI FAIQQYMPAP FYALDEVDSN LDGVNVERLS QMVRDICTKS QFVIVSHRKP MIEAADRMVG VTLRMSDKST LVTGVKVNG
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