Gene Mlab_1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1012 
Symbol 
ID4795422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1018367 
End bp1021816 
Gene Length3450 bp 
Protein Length1149 aa 
Translation table11 
GC content52% 
IMG OID640099682 
Productcondensin subunit Smc 
Protein accessionYP_001030448 
Protein GI124485832 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.750966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACATTG TCCAGGTTGA CATCGACAAC TTCAAGTCTT TTTCCAGAAA GACAAAAATT 
CCCTTTTATG AAGGATTTAC TGTAATATCC GGGCCGAACG GTTCGGGAAA AAGCAACATC
ATCGACTCTA TCCTTTTCGT TCTATCTTTA TCCACCTCAC GCACCCTTCG CGCCGAAAAA
CTCACGGATT TCATCAATAC CATGTCTGGA AAAAATACCG CCGAGGTCAC CCTCACCTTT
TCGGACGAGA CAAAAATCCG CCGGAGGATC AAACGGACCG CAAACGGATA TTACAGTTAT
TATTATCTCA ATGAAAAGAC CTGTTCCCAA ACCGAAATCC TGGAGTATCT TGCAAAACGC
GGGATCAAGC CGCACGGATA CAATGTCGTG ATGCAGGGAG ATATCTCCCG CATCATGGAT
ATGAGCGATC TGGAACGCAG ACGGATCATC GATGAGATCG CGGGGGTTGC GGAGTTCGAT
GATAAAAAAG AACAGGCTCT CGTGGAACTC GAGCAGGTTC GCGCCAGTAT CGACCGCGAA
GAGATCCTTC TTGCTTCATA CGCCAAACAA CTGGAGGAAC TCGCTGATGC CAGAGAAGAT
GCGGTAAAAT ATCAGAAGCT TCAGGCGGAA CTCGATTATC TCAAAGCCGC AAAACAGATC
GTCAGGCTTC AGGATCTTGA GCGCGAACTC GGGTTGATCG CCCATTCGAG GTCCGAGCAG
GAAGAGAAAC GTGCAGGTAT CCGTAACGAC ATCTCTCTTC AGGAAAACGA GAAAAATTCC
CGTCTCGAGG AAGTTCGCGA GATCGATAAG GAGATCAGTC ACAAACAGGG TCCCGCCTAT
ATGCGGATCA TTGGGGGCAT TGAGGCAGAA AAAGGAAACA TCCGTGTTGC CGAGGAGACC
ATCATCCGCA GGAAAAAAGA GAAAGAGAGC AACCTTGCCG AGATGAACCG CCTGTATCTC
GATCTCCAGA AAAACCAGAA CACGCTCAAC GATAAGATCC GGGAATCACA GACGCTGCAG
ATCGACAAAG CGAATCTGGC GATGGAACTC GAGGCCCAGA AAAAAACTCT CGAGAAAGCC
CACGAGCTTG TCAGTAAATG CAGCCGGGAT TCAAAAGGGG CTCAGGCCGA ACTGGTCGAT
CTTATGCGGC AGGTCGAGGA GAAAAAGGAG GTACGCGGTT CGATCGTCGT TCAAAGGGAT
GGGATTATCG AACGGAGCCG TGTTCGGGCA CAGGAACTGG AAAAGCTTCA GAGGGAGCAG
GGTTCTCTCG CGGAAGAACG TTCCGAGAAG CAGGCCGAGA TCGACTCGCT CGAACACGAT
CTTTTGGATG CCAGGAAAAA CAAAGGGATC CTCGATAAAC AGATCGGCGA GACCGAGCGG
GCGATGCTTG GCGCACGTAA AGCTCTGGAA CCTCTCAGAG AAGAAATCGC CAGGCTGACG
AAAAAGCAGA TGCAGATCGA AGCCCAGCAG CAGGCATCCG GCGCTTCGGA CCGGACCATT
TCGGCTATTC TTGGTATGGA CGGCGTATTT GGGACCGTTT CGAGTCTTGG AAAAGTGATC
GACTCCGCAT ATGCCGTAGC GTTAAACATA GCGGCGGGCG GGCGGCTCAA CAACGTTGTT
GTCGACTCCG ATCAGACTGC GGCAAATGTT ATCCGCTATC TGAAAGATGA ACGGCTTGGT
CGCCTGACGC TTCTTCCGCT GAACAAGATG AAGCCTCAAC CTCCTCTTCC CCCGCTCGCC
GGCAACGGGG TTGTGGATTA TGCGATCAAT TTGATCGACT TCGATCCGGA ATACCGGGAT
GCTTTCAATT TAGTTTTTGG TCAGACGGTG GTCGTCGAGA CGCTGGATGC CGGCCGGCGG
CTCATGGGAA GATACCGGAT GGTGACGTTG GAAGGCGAAC TTCTCGAAAG AGGCGGGGCC
ATGACCGGCG GTTCGATCCG GAAAGATCTT CGCGGGTTCG GTGTTGCCGT CGGCCGCGAG
TCTGCGGATA TTTCTGCAAA ACTTGCCGAT CTGCGTAATG ATGAATCCGA TCTTGTGGCA
GCTGAAGCAC GCCACCGATC GGTTGCCGAA GGTCTTCGCG CCGAACGAAA CGAGTCTGAT
TCGGCGATCG TTAAATTCGA ATTAAAAATC AGTGACTGTA ATCGGATCCT CGATAAGATC
GCGGACGATG AGATTCGGGC ATCACGTCTT CTGGAAGAAA CGGATCGCGA TAAAAAAGAG
ACGGCAAATC AGGTGGCCGA ACTCGAGACG CGTGTGGACG CTCTGTCCGA TGAACTCGAG
GTCCTGAATC AGCGGGTGAG CGAACTGCGC TCTGTCCTGA ATGAGGATGA GTTCAATCTG
CTCACCGATA AACTGCAGAA AGCCCAGTCG AGTTACAATG ATACGTCCCG CCGGTATGAG
AACAAAGTGA ACGACCTTTC CGGTCTGAAT CTCGAACGTC AGCATTTCAA ACAAAATGTT
GAGCAGATAA CCCGGGAGCG TACCACTCTG GAGGGAAAAA ATGTCTCGAT CGATCAGGAG
ATTGCTGATT GTTATGCCGC GATCGATACG GCAAAATCCG CGATCACTGC GTTCGAGGAT
GAGATGAAGG CTTTCACCGG TGAGATCGAA CAGCTGACCG AGGAACGGAA CAAAGCTCAG
CATGCGGCGG ATGAAGCGCA GCTGCGGATC GTGACTTTGC AGGGTGACGA GGAGAGATGC
AATGTGCAGA TCTCCGCATT TGATGAAAAA TCCGCCTCTC TTGCGTTGGA GATGTCCGAG
ATCAAGGGTT CGATCAGTGA GGAAATCGTC TGCGATCTCT GCATGGACGA GATCCTCGAT
CGCGTCGCAA CAACCGAGCG TGCCGTCAGA AAACTTGGCA ACGTGAATAT GCGTGCCATC
GAGCAGTATG ATGAGGTCCA GAAACGTTCC ATTGAGCGGA CCGAAAAGAA GGAGACGCTT
TCCCGCGAAC GTCAGGCACT TCTCGATAAG ATCGATAGTT TCAAGCAGAT GAAGTTTGAT
GCGTTCATGA ATGCCTACTC GGCAATCAAC CTGCATTTCC AGGATATCTA CTCCCGTCTG
AACGAAGGTG CCGGTCATCT GGTTCTGGAT GATATTGAGG ATCCTTTCCA AGGGGGCATG
ACGTTTGAGG TCTCGCCGCG TGGAAAGGAA GTAACCCGGC TGAATATGAT GTCTGGGGGG
GAGAAGTCTC TTACGACCCT TTCGTTTATT TTTGCGATCC AGCAGTACAT GCCGGCGCCC
TTTTATGCGC TGGATGAGGT GGATTCCAAT CTGGACGGGG TGAATGTGGA GCGTTTGTCC
CAGATGGTCC GCGATATCTG TACGAAAAGT CAGTTCGTGA TCGTTTCGCA CAGAAAACCG
ATGATCGAAG CGGCGGACCG GATGGTGGGC GTGACTCTGC GTATGAGCGA TAAGAGTACG
CTTGTGACTG GTGTGAAGGT GAATGGCTGA
 
Protein sequence
MHIVQVDIDN FKSFSRKTKI PFYEGFTVIS GPNGSGKSNI IDSILFVLSL STSRTLRAEK 
LTDFINTMSG KNTAEVTLTF SDETKIRRRI KRTANGYYSY YYLNEKTCSQ TEILEYLAKR
GIKPHGYNVV MQGDISRIMD MSDLERRRII DEIAGVAEFD DKKEQALVEL EQVRASIDRE
EILLASYAKQ LEELADARED AVKYQKLQAE LDYLKAAKQI VRLQDLEREL GLIAHSRSEQ
EEKRAGIRND ISLQENEKNS RLEEVREIDK EISHKQGPAY MRIIGGIEAE KGNIRVAEET
IIRRKKEKES NLAEMNRLYL DLQKNQNTLN DKIRESQTLQ IDKANLAMEL EAQKKTLEKA
HELVSKCSRD SKGAQAELVD LMRQVEEKKE VRGSIVVQRD GIIERSRVRA QELEKLQREQ
GSLAEERSEK QAEIDSLEHD LLDARKNKGI LDKQIGETER AMLGARKALE PLREEIARLT
KKQMQIEAQQ QASGASDRTI SAILGMDGVF GTVSSLGKVI DSAYAVALNI AAGGRLNNVV
VDSDQTAANV IRYLKDERLG RLTLLPLNKM KPQPPLPPLA GNGVVDYAIN LIDFDPEYRD
AFNLVFGQTV VVETLDAGRR LMGRYRMVTL EGELLERGGA MTGGSIRKDL RGFGVAVGRE
SADISAKLAD LRNDESDLVA AEARHRSVAE GLRAERNESD SAIVKFELKI SDCNRILDKI
ADDEIRASRL LEETDRDKKE TANQVAELET RVDALSDELE VLNQRVSELR SVLNEDEFNL
LTDKLQKAQS SYNDTSRRYE NKVNDLSGLN LERQHFKQNV EQITRERTTL EGKNVSIDQE
IADCYAAIDT AKSAITAFED EMKAFTGEIE QLTEERNKAQ HAADEAQLRI VTLQGDEERC
NVQISAFDEK SASLALEMSE IKGSISEEIV CDLCMDEILD RVATTERAVR KLGNVNMRAI
EQYDEVQKRS IERTEKKETL SRERQALLDK IDSFKQMKFD AFMNAYSAIN LHFQDIYSRL
NEGAGHLVLD DIEDPFQGGM TFEVSPRGKE VTRLNMMSGG EKSLTTLSFI FAIQQYMPAP
FYALDEVDSN LDGVNVERLS QMVRDICTKS QFVIVSHRKP MIEAADRMVG VTLRMSDKST
LVTGVKVNG