Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1005 |
Symbol | |
ID | 4794915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | + |
Start bp | 1005587 |
End bp | 1006948 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640099669 |
Product | hypothetical protein |
Protein accession | YP_001030441 |
Protein GI | 124485825 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.407756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCTCT TCGCAACCTC CATGGGGGCT TTCCTCAATC CTATGATCGC AACGATGGTG ATCCTTGCCC TCCCGGCGAT CGGACTTGAG TTTGGGGTTT CGGCGCGGGA TCTTGGTTGG ATGAGCACGG CATTTATCTT GGCAACTGCC ATTCTTTTGG TACCGGCATC CCGTCTTGTC GACAGTATCG GATACAAAAA ATCCTACATC ATCGGCGGCA TCGTTGTCGT AATCACCTGT TTCTTCTCGG TGTTTGCACC AGATTACACT ACCCTGATCA TTTTACGAAT CATTGCCGGG ATGGGATCCT CATTTATTAT GATAACCGGT CTTGCGATCC TGACAAGGGT GTATCCGGCA AATAAACGCG GTATGGTGAT TGGAATCAAC ACGGCAATGG TCTATGTCGG TGCATCCATG GGTCCGATCA TCGGCGGATT TTTGACTGAA TACACCGGAT GGCGCAGCAT ATTCCTGCTG ATGATCCCGC TTCTGCTGAT ATCTGCAGGC CTTATGATCA TCTTTCTCAA ACAGGAGTTT AAAAATCCAG GTAAATCCTT CGATTTCAAA GGCACGATCT TATACGGAGC AGCAATATTC TGCACGATGT ACGGTCTTTC CACCATTACC GACACCGGAT CCCTCTATCT CGCAATACTT GGAGCGTGCC TGATTGTCAT CTTCATGTGG TACGAACGAA AAGTTCCAGA ACCGGTTCTT CATGTGGATC TGTTCTTCAA AAACAAACGG TTCGCACGTT CATCCTACAC GGCACTTTTG AACTACGGCT GCACGTATGG GGCGGTCTAT ATGGTGAGTC TGTATCTCCA GTCGGTCGGT GCGCTGAGTG CGCTCGAGGC AGGATTCATT ATCTTCTTCC AGCCTCTCAT TCAGGCGATA ATGACCCCGA TCGCAGGAAA ACTCTCCGAC CGGTTCGACC CGAGATACCT CGTCACTTTC GGCATGGCGC TCTCGGCAAT AGGCGTAACC CTGCTTGCCG GACTCGGGCT TACCGCCGCC GTATCCTACA TCGCGATCAC GCAGGTGTTT ATCGGGCTTG GATCAGCTCT CTTCTCGGCG CCGAACACCA ATGCGATCAT GAGCTCGGTC CCGCAAAATG AATACAGTTC GGCATCGAGC ATCGTCGCAG TGATGAGGCA GCTTGGCATG ATCCTGTCGA TGGCCGTTTG TATGGCAGCG ATATCCGTCT TTGTCGGCGG TCTGGATATG CTTGGCCCCG ACATGTATCC CGAGTTCGTC CAGGCCCTGC AGATCTCGAT GCTGGTATGT GCAGGCCTTG CCGTGATCGG AATCCTGTTC TCATGGTTCC GTGGAAACGC ACCAACGGGG GCAGACGCAT GA
|
Protein sequence | MILFATSMGA FLNPMIATMV ILALPAIGLE FGVSARDLGW MSTAFILATA ILLVPASRLV DSIGYKKSYI IGGIVVVITC FFSVFAPDYT TLIILRIIAG MGSSFIMITG LAILTRVYPA NKRGMVIGIN TAMVYVGASM GPIIGGFLTE YTGWRSIFLL MIPLLLISAG LMIIFLKQEF KNPGKSFDFK GTILYGAAIF CTMYGLSTIT DTGSLYLAIL GACLIVIFMW YERKVPEPVL HVDLFFKNKR FARSSYTALL NYGCTYGAVY MVSLYLQSVG ALSALEAGFI IFFQPLIQAI MTPIAGKLSD RFDPRYLVTF GMALSAIGVT LLAGLGLTAA VSYIAITQVF IGLGSALFSA PNTNAIMSSV PQNEYSSASS IVAVMRQLGM ILSMAVCMAA ISVFVGGLDM LGPDMYPEFV QALQISMLVC AGLAVIGILF SWFRGNAPTG ADA
|
| |