Gene Mlab_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1000 
Symbol 
ID4795424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1001961 
End bp1002494 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content54% 
IMG OID640099663 
Producthypothetical protein 
Protein accessionYP_001030436 
Protein GI124485820 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0241842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.257315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTTA TTCTTATCTG GGCCTGCTGT GTCGGCTGGG TCTATTTCGT TGCGTTAGGC 
GAACCGTTTT TTGTTCTGAT CGGAGAGATT TCTCTCGGCG TTCTTGCTGC GATTGTGATC
TTCGTTCTGA TCTGGTCGCG TCTGTATTAC GCCTCGGTCG TGTATCATCT GAATGATACG
GAGATGACCT GGAAACGCGG TGTCTGGTTT AGAAAGACCG GCATTGTCCC CTACAACCGT
ATCACGAACG TGGATATCGT TCAGGGCCCC GTGATGCGGA TCTTCGGCAT CTCGAATTTA
AAAATCGAGA CAGCCGGCGG GAACTCCGGG AAGAACTCGG CCGAGATTCA GCTGGAAGGC
ATCGCCGATC CCGAGCCGCT GCGTGCCATG ATCATGGATT TCGTTCGCGG CAATGCCCCA
AGCCCTGCGG CGACCGGCGT TGATTTCGGC AGACGTTCTG CTCCGGCAGA TATGCAGGCA
CTTCTTGCCG AGGTCACGGC GATTCGAAAG CTTCTGGAAG CAGAGAGAAA ATAA
 
Protein sequence
MAVILIWACC VGWVYFVALG EPFFVLIGEI SLGVLAAIVI FVLIWSRLYY ASVVYHLNDT 
EMTWKRGVWF RKTGIVPYNR ITNVDIVQGP VMRIFGISNL KIETAGGNSG KNSAEIQLEG
IADPEPLRAM IMDFVRGNAP SPAATGVDFG RRSAPADMQA LLAEVTAIRK LLEAERK