Gene Mlab_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0988 
Symbol 
ID4796102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp990239 
End bp991027 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content50% 
IMG OID640099651 
ProductRNA polymerase Rbp10 
Protein accessionYP_001030424 
Protein GI124485808 
COG category[K] Transcription 
COG ID[COG1378] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.883487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.725953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAGT TCGTTGAAAA ACTGAAATCG ATCGGAATGA CCGAAAACGA GGCAAAAGTC 
TACGCGGTTC TTTTCGAACT GAAGGTAGCG ACCGCCCGGG AGATGCACGA GATCAGCAAG
GTGCCGCGAA ACAAAGTCTA CGAAGCACTC GCCGCTCTTG AAGAGAAGGG ATTTGTCGGT
ACGGCAGAAG AAGCAGGACC TTCTCGGTTT TTTATCCACG ACATCACCAA GACGTTCAAC
CGGTTAAGAC AGGAGAATCT CGAACGGCTC AATGACGTCG AACAGTATCT CCATTCAAGA
ATCACCTTCC AGCACAACCG CCCGCTGCTC TCGCACACTC TCCAGAATAC CTGGGCAATC
GACAGTCATC TTCGGATGAT GTTCAACAGA AGCAAAAAAG AGATCGTGAT GATCTGTCAC
GACACGGCCT ATGTGAAAAA ACATATCTTG AACCTGAAAA ATCTCTCGAA AAAGATCGAC
CTCTATTTAA TCGTCCCGGA CGACACCGAC CCGGATATGT TTCCAATAAG GTGCTACAAA
CTTCAGCCCG AGATGAAGGA GTTCATGGAT GCGCGAAATA CCGACGGGTT CGGGACGGAA
CCAGAGTTCC AGCTGACCAT CCATGCAGAC CGGCAGGACA CGCTGATCAT CGGTAAACTG
GACGGACGGG AGATCGGGAT CTTTTCCGCA GGCAATCCGT CGGTCTCCAT TTTGGTAAAA
TACCTGCTCA AAAACATTAT TCCGCTCACC AAAGAAACAG CCTCGGAACA GCCGGATCAG
GCCGCCTGA
 
Protein sequence
MQEFVEKLKS IGMTENEAKV YAVLFELKVA TAREMHEISK VPRNKVYEAL AALEEKGFVG 
TAEEAGPSRF FIHDITKTFN RLRQENLERL NDVEQYLHSR ITFQHNRPLL SHTLQNTWAI
DSHLRMMFNR SKKEIVMICH DTAYVKKHIL NLKNLSKKID LYLIVPDDTD PDMFPIRCYK
LQPEMKEFMD ARNTDGFGTE PEFQLTIHAD RQDTLIIGKL DGREIGIFSA GNPSVSILVK
YLLKNIIPLT KETASEQPDQ AA