Gene Mlab_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0972 
Symbol 
ID4794813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp965356 
End bp965907 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content58% 
IMG OID640099636 
Producttryptophan--tRNA ligase 
Protein accessionYP_001030409 
Protein GI124485793 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00655598 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATC CCGTCTTATG GATAACCGAC CATCTCGGCG TCGTCAAAAC CGACATAACA 
ACCCTCTCCG TCGACGTAAT CGTCAATGCC GCAAACACCA CGCTTCTTGG TGGCGGGGGC
GTGGACGGGG CGATTCATCA TGCGGCCGGT CCCGGACTTC TTGCTGAGTG CCGGACGCTT
GGGGGGTGCA GGATCGGGGA AGCGAAAATC ACGAAAGGCT ATGCTCTCCC CGCGAAATAC
ATCATCCACA CGGTTGGCCC CGTCTGGTGG GGCGGGAATG AAGGAGAGCC GGAACAACTG
AGGGCCTGTT ATTTTCATTC GCTCACGCTT GCCGGGGAAC ACGGTCTTCG AACCATCGCC
TTTCCCGCCG TAAGCACCGG AGTATACGGC TATCCGAAAG ACAAAGCCGC CGTCATCGCG
GTCGAAACGG TTCTGTCGTT TCTCCGGGAC GATCCGGATG CATTCGACCG GGTCATTCTG
GTCGCCCACT CCAATGCTGA CTTCCAAAAT CTCACGGCTG CGGGGAAAAT GGTTCGAATC
GGTACGACGT GA
 
Protein sequence
MEDPVLWITD HLGVVKTDIT TLSVDVIVNA ANTTLLGGGG VDGAIHHAAG PGLLAECRTL 
GGCRIGEAKI TKGYALPAKY IIHTVGPVWW GGNEGEPEQL RACYFHSLTL AGEHGLRTIA
FPAVSTGVYG YPKDKAAVIA VETVLSFLRD DPDAFDRVIL VAHSNADFQN LTAAGKMVRI
GTT