Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_0972 |
Symbol | |
ID | 4794813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 965356 |
End bp | 965907 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640099636 |
Product | tryptophan--tRNA ligase |
Protein accession | YP_001030409 |
Protein GI | 124485793 |
COG category | [R] General function prediction only |
COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00655598 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATC CCGTCTTATG GATAACCGAC CATCTCGGCG TCGTCAAAAC CGACATAACA ACCCTCTCCG TCGACGTAAT CGTCAATGCC GCAAACACCA CGCTTCTTGG TGGCGGGGGC GTGGACGGGG CGATTCATCA TGCGGCCGGT CCCGGACTTC TTGCTGAGTG CCGGACGCTT GGGGGGTGCA GGATCGGGGA AGCGAAAATC ACGAAAGGCT ATGCTCTCCC CGCGAAATAC ATCATCCACA CGGTTGGCCC CGTCTGGTGG GGCGGGAATG AAGGAGAGCC GGAACAACTG AGGGCCTGTT ATTTTCATTC GCTCACGCTT GCCGGGGAAC ACGGTCTTCG AACCATCGCC TTTCCCGCCG TAAGCACCGG AGTATACGGC TATCCGAAAG ACAAAGCCGC CGTCATCGCG GTCGAAACGG TTCTGTCGTT TCTCCGGGAC GATCCGGATG CATTCGACCG GGTCATTCTG GTCGCCCACT CCAATGCTGA CTTCCAAAAT CTCACGGCTG CGGGGAAAAT GGTTCGAATC GGTACGACGT GA
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Protein sequence | MEDPVLWITD HLGVVKTDIT TLSVDVIVNA ANTTLLGGGG VDGAIHHAAG PGLLAECRTL GGCRIGEAKI TKGYALPAKY IIHTVGPVWW GGNEGEPEQL RACYFHSLTL AGEHGLRTIA FPAVSTGVYG YPKDKAAVIA VETVLSFLRD DPDAFDRVIL VAHSNADFQN LTAAGKMVRI GTT
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