Gene Mlab_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0924 
Symbol 
ID4795770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp919369 
End bp920460 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content56% 
IMG OID640099589 
Producthypothetical protein 
Protein accessionYP_001030362 
Protein GI124485746 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1499] NMD protein affecting ribosome stability and mRNA decay 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.642207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.738478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCA CACAAGGATT CTGTCCCAAA TGCGGTGCTC CGTCGGAAAA CGGCGAACTC 
TGCGGCAAAT GCCGGGTCAA AGACACCGTC TGGGTAACCA TCGCTCCCCG TGCAGAATGC
ATCATCTGCC CTACCTGCGA GTCCATAAAA ACCGCTGGAA TGTGGTCCGA CAGTGCGGTC
GACAAAGAGG AACTTGGTCA AAATCTCGTC AACAGCGTCA TCGTGTTCCA CAAAGACGTC
GAAGACATCC AAAAAGAGAT CAGCATCATC GACACGAGCA GCAACCGGTC CCTTGCAACC
GTCCATGTTT CAGGAAACCT CTACGGCATC CCTCTCGAAG AGACCACAAA AGTCAAGATC
GTCTGGGCCC GCGAACAGTG CGACCGGTGT TGCAGGATCG CCGGAAGCTA CTACGAAGGC
GTCATCCAGG TCAGAGCCTC GGGAAGAAAA CCGACCCAGT TCGAACTGCG CCGTGCAGCC
GAGATCGCCT ATCAGGTCGA AGACCAGCTC CAGACTGCCG GCGACCGGCT CTCCTTCGTC
TCGGATATCG ACGAGACCAA AGACGGGATC GACATCGTCT TCAGCTCGCA GACGATCGGA
GCGGCCATCT CCCACGACAT CTGCGGAGCG CTCGGCGGTT CCTTTACCAC CCACCCGAAA
CTCGTCGGCC AAAAAGCCGG CATCAACATC TACCGGGTGA CCTACTCGCT TCGTCTGCCG
AGATTCTCCC GCGGGGACAT CATCAAACAC GGCAGAGAAT ACTTCCAGAT CCTTCGCCAG
GCAAAAGACA CCCTCTTCGT CCGTGATCTC GCGACCGGTC AGTCCCGTGC CTTCAGAGAG
GATGAAAACG ATCCGCTTCT TGGAAACATC CACGAACCCG AGACGGGCGT CGTCATCTAC
AAGGACGCAG GGCTTTTAGG TTTTCTCAAC CTCAAAACCG AAACGACCGA AGAGATCGCC
GAACGTTCCT GGCTCGATAC AAGGGAAGGC GACACGATCC TGTTTGTCCG TGACGGAGAA
ACGCTTGTGT TAGTTGGAAG AGATGAAGAT CAGGAAGATT TCGAAGCGAT CGCTCCCGAA
TGCAGCGAGT GA
 
Protein sequence
MSLTQGFCPK CGAPSENGEL CGKCRVKDTV WVTIAPRAEC IICPTCESIK TAGMWSDSAV 
DKEELGQNLV NSVIVFHKDV EDIQKEISII DTSSNRSLAT VHVSGNLYGI PLEETTKVKI
VWAREQCDRC CRIAGSYYEG VIQVRASGRK PTQFELRRAA EIAYQVEDQL QTAGDRLSFV
SDIDETKDGI DIVFSSQTIG AAISHDICGA LGGSFTTHPK LVGQKAGINI YRVTYSLRLP
RFSRGDIIKH GREYFQILRQ AKDTLFVRDL ATGQSRAFRE DENDPLLGNI HEPETGVVIY
KDAGLLGFLN LKTETTEEIA ERSWLDTREG DTILFVRDGE TLVLVGRDED QEDFEAIAPE
CSE