| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0856 |
|---|
| Symbol | |
|---|
| ID | 4795342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 842569 |
|---|
| End bp | 844518 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640099519 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001030294 |
|---|
| Protein GI | 124485678 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.935712 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.465758 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TCACCGTTGC ATTAGCCGGC AACCCGAACT GCGGGAAGAC GACCCTTTTC
AATAACCTCA CCGGGATGCG TCACCATGTG GGAAACTGGC CGGGTAAGAC CGTCACGATC
GAAAAGAAAG AGGGACGGAT CGTTTACGAC GATACGACAC TCGAGATCGT GGATCTGCCT
GGAACCTACA GTCTGAGCGG ACGATCGCTC GAAGAAGAGA TCGCGGTCGG TTATCTCTTA
CACGAAAAAC CCGACGTCGT CGTCAACATC GCTGACGCCG CACATCTGGA GAGGAATCTG
TACGTCACGC TCCAGCTGAT CGAACTCGGC GTCCCGATGA TCCTTGTTTT GAACATGAAC
CGGTATGCGG ACGCGGAAGG CGTCGTCATC AATACAGGTC TTCTCAGCGA AATGCTCGGC
ATCCCGGTCA TACGGATCGA AGCGATCGAT GAAACCGGAA AAGACGAGCT CATCAAAGCG
ATCCTTGCAC GCCCCGCTCC CCCTGAAAAG ACCATCCGGT ACGACCACGA GCTTGAGGAA
CATATCGGCG AAGCAACCAA AATCACCGGA TCGCGCTGGT CTGCGATCCA GGCTCTTATC
CACGGCTCGG CAGAACCCAA AATCGAATCG ATCAGGACCC ACCTTGCAGG CATCTACGGG
ACGAAGCCCG GAGAGATCTT TGCGGATCAG CGGTATGGAT TCATCGCCGG TCTTCTGCAC
GAGAGCGTGG ATCATATGGA TGCCGGCGGC AAAAACCAGT CGGAGAGGAT CGACAGGCTC
GTGACCAGCA GATGGCTCGG GTTCCCGATT TTTCTCGCCG TGATGTATCT GATCTTCCAG
ATCGTGTTCG CGGTCGGCGC TCCGGTCATG GATCTGATCG ACGAAGGGTT CGGGCTGCTT
GGAGAGGCGG CATCGGCGGG TCTTGCCGAT ATCGCCGCTC CCGACTGGGT CACGTCTCTG
GTTTGCGACG GGATCATCGG CGGCGTTGGG TCGGTCGTGA TCTTTCTGCC GAATATCTTC
CTGTTGTTCC TGCTTCTCGC GATTTTAGAG GATTCGGGAT ATCTGGCACG GGTTGCCGTT
ATCATGGACC GGGTCATGCA CAAACTTGGT CTGCATGGAA AATCCTTCAT CCCGATGATC
CTCGGATTCG GGTGCAGCGT GCCGGCAATT ATGGCGACCC GGACGCTGGA GACAAAACGC
GAACGGTTCT TAACGATCCT GATCACGCCG TTTATGTCCT GCGGGGCACG GCTGCCCGTG
TATCTTCTGC TTGTTGGGAT CTTCTTCGCG GCTGAAATCC AGGGGCTCGT GATGTTTTCC
CTGTATCTGC TGGGCATTTT CGTGGCGCTG ATCACCGGGC TTCTGCTTCG AAAGACGCTC
TTTAAGGGCG AGTCTTCGGC TTTCGTTCTG GAGATGCCGC CTTACCGGCT TCCGACAATC
AAAGGTGTTT TGATCCATGC CGGAGAGAAG TCCTGGGAGT TTCTGCGCAA AGCCGGGGTG
ATCATTTTCC CGGCGGTGCT GCTGATGTGG CTGCTTGCTT CTCTGCCGTT CGGCGTCGAG
TATGCTTCGG CTGATTCGCT GATAGGTATG GCGGGGTCAA CGATCGCCCC GATCTTTGCA
CCGCTCGGGT TCGGATTCGC CGAGGCGGGA GTCGCGATCC TGATGGGTCT TCTTGCAAAA
GAAGTGGTTG TCGGAGCATT TGGGACGCTT TACGGCGTGG GCGAAGAAGG GCTAGGCGAT
GTGCTGATGA ACGTCTTTAC GCCGCTTTCG GCCTACTCGT TCATGGTGTT CATCCTGCTC
TATATGCCCT GTCTTGCGGC GATGTTTACG ATCCGGCAGG AGACCCGCTC GTGGAAGATG
ACGGGGCTTG CGGCAGTAGG CATGTGCGTG ATCGCGTGGA TCGTTTCCTT CATCGTGTAT
CAGGGGGGTG TCCTTCTTGG TTTTGCCTGA
|
|---|
| Protein sequence | MKKITVALAG NPNCGKTTLF NNLTGMRHHV GNWPGKTVTI EKKEGRIVYD DTTLEIVDLP
GTYSLSGRSL EEEIAVGYLL HEKPDVVVNI ADAAHLERNL YVTLQLIELG VPMILVLNMN
RYADAEGVVI NTGLLSEMLG IPVIRIEAID ETGKDELIKA ILARPAPPEK TIRYDHELEE
HIGEATKITG SRWSAIQALI HGSAEPKIES IRTHLAGIYG TKPGEIFADQ RYGFIAGLLH
ESVDHMDAGG KNQSERIDRL VTSRWLGFPI FLAVMYLIFQ IVFAVGAPVM DLIDEGFGLL
GEAASAGLAD IAAPDWVTSL VCDGIIGGVG SVVIFLPNIF LLFLLLAILE DSGYLARVAV
IMDRVMHKLG LHGKSFIPMI LGFGCSVPAI MATRTLETKR ERFLTILITP FMSCGARLPV
YLLLVGIFFA AEIQGLVMFS LYLLGIFVAL ITGLLLRKTL FKGESSAFVL EMPPYRLPTI
KGVLIHAGEK SWEFLRKAGV IIFPAVLLMW LLASLPFGVE YASADSLIGM AGSTIAPIFA
PLGFGFAEAG VAILMGLLAK EVVVGAFGTL YGVGEEGLGD VLMNVFTPLS AYSFMVFILL
YMPCLAAMFT IRQETRSWKM TGLAAVGMCV IAWIVSFIVY QGGVLLGFA
|
|---|
| |