Gene Mlab_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0717 
Symbol 
ID4795535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp690838 
End bp691776 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content54% 
IMG OID640099377 
Producthypothetical protein 
Protein accessionYP_001030156 
Protein GI124485540 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.701444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGCA TACTGAAAGT GACGGATGTC TGCGTCCATC TGACCACGGA AAACGGATCG 
GTCCGGGCAG TGGACAATGC CTCCTTTTCG ATAAAAGAGC ATGAGACGTT CGCCCTTATT
GGAGAATCGG GATCCGGCAA GTCGGTTCTC GGCCTTGCGG TGCTGCGGTT ACTTCCCGAC
AATGCAATTT TTTCCGGCAA TATCTCTCTT GACGGGATCT CTCTTACGGA TCTTTCAGAA
AAGGAGATGC AGAAGATCCG GGGAAAAACG ATCGGTTCGA TTTTTCAGAA CCCGTATCTC
TCGATGAACC CGGGGATCCG GGTCGGAAAC CAGATCGCGG AGCCGATGTG GACGCATCTG
GGGATAACAA AAGAAGCTGC CAGAGAAAAA GCCGTGTCGC TTCTGGAAAG GTTTTCCATC
GTGCCTGGAA AGACCCGTGC ACGCGAGTAT CCTTTCCAGT ACAGCGGAGG TATGCTCCAG
CGGGCGATGG TCGCCATGGG AACGGCGGCA AATCCTCAGC TGATCATCGC AGACGAGCCG
ACGAAAGGGG TCGACTCTCT CAAAAAACAG GAGATCGCGG AGACTTTTAG AAGGGTCTCT
GCCGAAGGAT GTGCTTTTCT TTTGATAACG CACGATATTG ATTTTGCCAA AGCGATGGCA
AACAGGATCG CGGTAAACTA CTGCGGCGAG ATCCTCGAAA TCGCTCCAAC AGAGATGTTT
TTCAAAGAAC CTCTTCATCC TTACTCCCGG GCCCTGCTCG ATTCCCTGCC GGAACGCGGG
ATGCATCCGA TCCCCGGCCC CTCCCCGTCG ATGATCGAGG TCCCGGACGG ATGCAGATTT
AATCCGCGGT GCCCCTTTGC CGACAACAGG TGCCGGACGG AAAAACCGCC GATGACCGAA
ACGAACGGAC GAACCGTGAG GTGCTGGAAG TATGCTTAG
 
Protein sequence
MTCILKVTDV CVHLTTENGS VRAVDNASFS IKEHETFALI GESGSGKSVL GLAVLRLLPD 
NAIFSGNISL DGISLTDLSE KEMQKIRGKT IGSIFQNPYL SMNPGIRVGN QIAEPMWTHL
GITKEAAREK AVSLLERFSI VPGKTRAREY PFQYSGGMLQ RAMVAMGTAA NPQLIIADEP
TKGVDSLKKQ EIAETFRRVS AEGCAFLLIT HDIDFAKAMA NRIAVNYCGE ILEIAPTEMF
FKEPLHPYSR ALLDSLPERG MHPIPGPSPS MIEVPDGCRF NPRCPFADNR CRTEKPPMTE
TNGRTVRCWK YA