Gene Mlab_0666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0666 
Symbol 
ID4795695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp637168 
End bp638367 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content49% 
IMG OID640099326 
Producthypothetical protein 
Protein accessionYP_001030105 
Protein GI124485489 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
[TIGR01208] glucose-1-phosphate thymidylylransferase, long form 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTGTG TAATTCTTGC AGCAGGTGAA GGTTCGCGTA TGCGGCCCCT CACGACGTCC 
CGCCCGAAGG TTATGCTGCC TTTAGCGGGA AAGCCGATGC TTGAACATCT CATCTGTAAT
GTGCGTGATG CCGGCATTAC GGAGATTCTT GTTGTTGTCG GCTACCATGA AGAATCGATC
CGGACATGGT TTGAGAGCGG TTCAAAATTC GGTGTGTCGA TACAGTATGT TACCCAGCGC
AGACAGATGG GAACGGCGGA TGCCCTGAAA ACGGTCGAGC CGTTCATCCA TGATACATTT
CTCATGCTGA ACGGGGACAT GATCCTTGAA AGATCCGATT TGACAAATAT TATTGATCTT
CCAAGTCCGG TCATGGCCAC CTCGACAACA ACACATCCGG AAAGCTTCGG CGTGGTGACG
GTAGCAAACA ATAAGATCAC CTCGCTGGAA GAAAAATCCC TTCACCCAAA ATCAAATATC
ATTAACGCCG GGGCATATCT CTTCGATGCT GAAATATTTG CCGTCCTAAA AAAACTTTCA
CTGTCAACCC GGGGGGAGTA TGAACTGACC GATGCTTTGA CCGATTATAT CGGTGATGGA
AAACTTACCG CGTATCCATT GTCCGTCTGG ATGGATGTGG GCTATCCCTG GGATATGCTG
ACGGCAAACG AACATCTCCT TGAGCGTATT TCGAGCGAAT TAAACGGAAC GATTGAAGAA
AACGTGATAG TAAAAGGTCA GCTGATTCTT GGAAAAGGAT CGGTCGTCAA ATCAGGAACA
TACATCGAAG GTCCCTGTAT TATCGGCGAA AACACCGTTG TCGGTCCAAA TGCCTACCTT
CGCCCGGGAA CGACGGTTGG AAACAACTGT CACATCGGTC ACGCCGTCGA GATCAAAAAT
TCCATCATCT TTGATGATAC AAAAGTCCCG CATTACAATT ATATCGGCGA CAGCGTGATT
GGAAGCGGAT GCAACTTCGG CGCCGGCACA AAGATCGCAA ACCTTCGTCA TGACCATGGT
CCGGTAAAGG TAGGCGGAAG ATCAACCGGC AGAAAGAAAT TTGGGGCAGT CATTGGGGAC
GATGTACTGT TTGGGATCAA TTGTTCCGTA AACACCGGGT CTTCGATCGG CAGCGGGACG
AGAGTCGCAC CCCATACTCT TGTCACAGGG ATGATCGAAG ATAAAACGGT GGTGAAGTAA
 
Protein sequence
MQCVILAAGE GSRMRPLTTS RPKVMLPLAG KPMLEHLICN VRDAGITEIL VVVGYHEESI 
RTWFESGSKF GVSIQYVTQR RQMGTADALK TVEPFIHDTF LMLNGDMILE RSDLTNIIDL
PSPVMATSTT THPESFGVVT VANNKITSLE EKSLHPKSNI INAGAYLFDA EIFAVLKKLS
LSTRGEYELT DALTDYIGDG KLTAYPLSVW MDVGYPWDML TANEHLLERI SSELNGTIEE
NVIVKGQLIL GKGSVVKSGT YIEGPCIIGE NTVVGPNAYL RPGTTVGNNC HIGHAVEIKN
SIIFDDTKVP HYNYIGDSVI GSGCNFGAGT KIANLRHDHG PVKVGGRSTG RKKFGAVIGD
DVLFGINCSV NTGSSIGSGT RVAPHTLVTG MIEDKTVVK