| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0599 |
|---|
| Symbol | |
|---|
| ID | 4794738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 568435 |
|---|
| End bp | 569301 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640099257 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001030040 |
|---|
| Protein GI | 124485424 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0114109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0489829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAT TCGCAGGAGA TAAAGACGTG AATCCGGGAG ATGTTGTTGG GATCATCGGC
GGATTCGGCG GCATGGGTCA TCTGTTCTCG GCGGTCTTCG AACGTGCGGG TTACAAAGTC
CTGTGTTCGG GGAGAAAAAC ACCGGTCTCC AACGCGGATA TTGCCTCTAC CTGCGATATT
ATTATCGTCT CTGTTCCGAT TCATGACACC GTCCGGGTGA TCGATGAGAT CGCTCCGCTC
TTGAACGAAG AGCAGCTTCT CTGCGATCTG ACCTCCATAA AAACCGCTCC GGTTGACGCG
ATGCTGAAAT CCAAAGCACA GGTAATCGGG CTGCATCCGA TGTTCGGCCC ATCGGTTCCC
ACGATCTTTG GTCAGACGAT CGCGGCATCG CCGGTCAGAT GCGATGAAAA AACGCGGCAC
ACGCTCTATC AGATATTTAC GAACGAAGGA GCGAAGATTT GTCAGATGGA GCCAAAGGAG
CATGACAAAA TCATGAGCAT CGTCCAGGGT CTTGTACACT TCACGACCCT CTCCGTTGCC
GAGACGATAA AAAATACCGG CATCCCGCTT GAAGCAATTC TTCCGGTGAT GAGTCCAGTT
TATCGGATAG AACTTGGGTT GGTCGGAAGA ATCCTCGGGC AGGATCCGTC ACTATATGCA
GACATACTGC AGATGAACCC GGAAACGGTC GGTATTATTG AAAAAATGTC AGATTCCGTC
ACTGCCTTGA AAGCGATCGT CGCATCGAAG GATTCTGAGA AGTTCGCCGC GTTCTTCACG
GAAAACAGCG ATGCGTTCAA AGCCTATATT CCCCAGGCAA CGGAAGAGAC CGATCTTATG
ATAAATACAC TGGTGAAGAT GAAATGA
|
|---|
| Protein sequence | MKSFAGDKDV NPGDVVGIIG GFGGMGHLFS AVFERAGYKV LCSGRKTPVS NADIASTCDI
IIVSVPIHDT VRVIDEIAPL LNEEQLLCDL TSIKTAPVDA MLKSKAQVIG LHPMFGPSVP
TIFGQTIAAS PVRCDEKTRH TLYQIFTNEG AKICQMEPKE HDKIMSIVQG LVHFTTLSVA
ETIKNTGIPL EAILPVMSPV YRIELGLVGR ILGQDPSLYA DILQMNPETV GIIEKMSDSV
TALKAIVASK DSEKFAAFFT ENSDAFKAYI PQATEETDLM INTLVKMK
|
|---|
| |