| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0583 |
|---|
| Symbol | |
|---|
| ID | 4795526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 555538 |
|---|
| End bp | 556107 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640099241 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001030024 |
|---|
| Protein GI | 124485408 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.113671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.000275721 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAA ATACCAAAAA AATAGCCGAG ATCGCAGTTA TTCTCGGTAT CGACGAGCAA
ACCTGCCGGA CGATCGCAAA AGAGTATGAT GAGATCCTTC CCTGCAAAAA AATAGGGAAA
GTCAACGTGT ATGAGGACAA TACCGTCGAC CGTTTCAGAA AGATCGCCGA CCTTCAGGCA
CAGGGACTCC CCAAAGAAGT GATCATCCCG GCGATCCGCG GAGGAAAATC CCTGCAGGAA
CGGGCCATCG AGGATATGAA AAAGATGGGG GTGGATATCT CTAACGAACC AAAAAAGGAA
GCACCAAAAC CCATTCCCCG TTCCGAGACG GAAGAAGAGT TGATCCTCGC CGTTCGATCC
GCCGAGTCAA GCATTGCCGC AATGGAACAC CGCCTCTCCG CCTTCCGGGA AAAATCCGCT
GACGATACCG CCGCCATTCT GGATGCGGTG TCTTCTGTCT CTGCAGAAGT TGCCGAATTA
AAAGCGCAGG TCCACACCCT CTGGGATCAG ATCGCAGCCC TGGAAGAATT CCTTCGTGCT
TCCCAGAACA AATCCTTCTG GAAACGCTGA
|
|---|
| Protein sequence | MAENTKKIAE IAVILGIDEQ TCRTIAKEYD EILPCKKIGK VNVYEDNTVD RFRKIADLQA
QGLPKEVIIP AIRGGKSLQE RAIEDMKKMG VDISNEPKKE APKPIPRSET EEELILAVRS
AESSIAAMEH RLSAFREKSA DDTAAILDAV SSVSAEVAEL KAQVHTLWDQ IAALEEFLRA
SQNKSFWKR
|
|---|
| |