Gene Mlab_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0580 
Symbol 
ID4794872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp550528 
End bp551778 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content54% 
IMG OID640099238 
Producthypothetical protein 
Protein accessionYP_001030021 
Protein GI124485405 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0109764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000964541 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGCAG AAACCGCCGA GTCGCTGAAG CTTCTCAAAA ATATATCCCT CTATACGGAA 
ACCTACGGGT GTACCTACAA TGCGGGAGAT ACCGAGAAAC TGATGGAGAT CGCCAGAAAT
CAGGGATGTG TTCCGGCATC GTCCGCAGAG GAAGCGGACG CAATACTCAT TAATACCTGC
GTGGTGATCG ACAAAACCGA GCAGCACATG TATGAACGTC TCGATTTATA CGCGGGCAAA
CTCCTTTTCG TCACCGGGTG TCTGCCGCCG GTCGCCGCGG ACGTGCTCCG CACACGGTAC
CCCAAGATCC ATATCATCGA CCCTGCCCTT ATCCATTCCT GCTATATGGA GGTCGGAACG
GCTCATGTTG GAACAAATGC CGTCCTCCAG ATCGCCAGGG GATGCAATGG GCACTGTACG
TACTGCATCA CGCGGCTCGC ACGGGGAAAG CTGGTAAGTT TTTCAGCCGA AGACATCGTT
CGTCAGGCAA AAAGTATCGT TGAAGCGGGA GCAACCGAAA TCCAGCTGAC GGCACAGGAT
ACATCGTCGT GGGGCCTCGA CCGAAACGAC GGTCTGAGAC TCCCGGATCT TTTACGGCAG
CTCTGCGCGA TCCCCGGTAA TTTCATGATC CGGATCGGGA TGGCAAATCC CGATACGCTT
CTCCCGATCC TCGATGATTT TCTTGACGCA CTCAAAGACC CAAAGATATT TCTGTTTCTG
CACATCCCGG TCCAGTCGGG ATCGGATTCG GTCCTCAGGC TGATGGGGCG GCGCTACACC
TCGGCCCAGT ATGAAGAGAT CTGTCAAAGG GCACGCAAAG CGTTCCCGGA GATCAGAATA
AGTACCGATT ATATCGCGGG ATTTTCCGGC GAAACGGATG AAGACGCTGC AAAGTCCGCA
GAACAGATCA GGCGGACAAG ACCCGGAAAG GTGAACATCA CGCGTTTTTC CGTTCGCCCG
AACACGCCGG CCGCTAAGAT GAAAAAAATC CCGGAACCGA TCAAAAAGCA GAGGTCGCGG
GAGCTTACCG ATGCGGCAAA CGAGGTGTAT GACGCCAATA ACGAAGCACT GATCGGCCAT
ATCATGACGG CTGTCGTGAC GGAAGTGGTA AAAGCAGGAA GTGTTACGGC GCGTGACAGG
ACCTATCAGA ATATTGTTAT CATGGAAAAT CTCGAGATCG GAACCGAGAT AACGGTAAAG
ATAACCGGAC ACCGCCGCCA TTATCTGATC GGCGAACGGA TCGTGCCCTG A
 
Protein sequence
MDAETAESLK LLKNISLYTE TYGCTYNAGD TEKLMEIARN QGCVPASSAE EADAILINTC 
VVIDKTEQHM YERLDLYAGK LLFVTGCLPP VAADVLRTRY PKIHIIDPAL IHSCYMEVGT
AHVGTNAVLQ IARGCNGHCT YCITRLARGK LVSFSAEDIV RQAKSIVEAG ATEIQLTAQD
TSSWGLDRND GLRLPDLLRQ LCAIPGNFMI RIGMANPDTL LPILDDFLDA LKDPKIFLFL
HIPVQSGSDS VLRLMGRRYT SAQYEEICQR ARKAFPEIRI STDYIAGFSG ETDEDAAKSA
EQIRRTRPGK VNITRFSVRP NTPAAKMKKI PEPIKKQRSR ELTDAANEVY DANNEALIGH
IMTAVVTEVV KAGSVTARDR TYQNIVIMEN LEIGTEITVK ITGHRRHYLI GERIVP