Gene Mlab_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0575 
Symbol 
ID4795680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp544070 
End bp544840 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content53% 
IMG OID640099233 
Productformylmethanofuran dehydrogenase, subunit C 
Protein accessionYP_001030016 
Protein GI124485400 
COG category[C] Energy production and conversion 
COG ID[COG2218] Formylmethanofuran dehydrogenase subunit C 
TIGRFAM ID[TIGR03122] formylmethanofuran dehydrogenase subunit C 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00575915 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000443842 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGACGGA TAACTCTTTT TTTACGTGAA GAGATCAATC CGTATCTGCC GATCGAAGCC 
GAGTCAATAT GTCCGGAGAC GCTGTCGAAG AGGATCGATG TGCCGGTGTA TGTGGGTAAC
GAGCAGAAGA TGCTCAAGGA TGTGTTTTAC ATCAGAGTCG ACGGTGAGGC AGCCGGCCCT
TCGGCAACCG AAATCGTTTT GGCAGGGGAT TGTCATCAGG TCAAACGCGT TGGTGAATAC
ATGACCGACG GGAAGATCAT TGTCGAGGGG GACATAGGTA TGCACTGCGG GGATTTTATG
AGCGGCGGCA CTATCGAGAT CATGGGTAAT GCCGGCCACT GGCTCGGCCG CGAGATGCTC
GGCGGAAAGA TCCTCTGTCA CGGAAATGCC GGAAATTACT GCGGCTCCGG GTATCGCGGA
GGAAGAAAAG GCGTCCGCGG GGGAGAGATC CTTGTTGAGG GAGATGTTGG AGACTACTGC
GCCGAGTGTC TTTTTGGCGG ATTGGTCCAC GTAAAAGGAA ATGCAGGGAT TCACGCCGGA
TGCAACATGA AAGGCGGAAA ACTTCTGATC GAAGGTGACT GTCTGATGCC CTGCGGGGAC
ATGTTCGACG GAGAGGCTAT GGTGTACGGG CATGTAACGG ATTTTCTCCC CACCTTCGTA
GAGACAGGTA AAGTTACTGA CAATGGGCAT ACACTTACGG TTTTCAAAGG CGATATGGCA
CACCGAAATC CGAAAGGAAC CCTTCGGGTC GGATCATTCG ATCGGATTTG A
 
Protein sequence
MRRITLFLRE EINPYLPIEA ESICPETLSK RIDVPVYVGN EQKMLKDVFY IRVDGEAAGP 
SATEIVLAGD CHQVKRVGEY MTDGKIIVEG DIGMHCGDFM SGGTIEIMGN AGHWLGREML
GGKILCHGNA GNYCGSGYRG GRKGVRGGEI LVEGDVGDYC AECLFGGLVH VKGNAGIHAG
CNMKGGKLLI EGDCLMPCGD MFDGEAMVYG HVTDFLPTFV ETGKVTDNGH TLTVFKGDMA
HRNPKGTLRV GSFDRI