| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0572 |
|---|
| Symbol | |
|---|
| ID | 4795704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 540689 |
|---|
| End bp | 541774 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640099230 |
|---|
| Product | ribosomal-protein-alanine acetyltransferase |
|---|
| Protein accession | YP_001030013 |
|---|
| Protein GI | 124485397 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.591606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000177209 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TCGTCGATGT ATCCCTGCCG GTCGGACCGA TCCATCCGTG TTTCAAAGAA
CCCTGCAGGA TCAAATGTGA AACGCGGGGT GAACGGGTCG TGACCACCGA AGTGGAACTT
GGATACGTGA AAAAGGGAAT CGAAAAGATC ATGATCGGAC GGCCCTGGCA GGAGACGATC
TTCCTCGCAG AAAGGGTCTG CGGCATATGT TCCGTCGTTC ACAACACGGT GATCGTCGAG
GCTCTCGAAA AAATCAGCGG AATAACGGTT CCCCGAAGGG CCGAACTTCT CCGTCTGATC
TTAAACGAAC TTGACCGTAT CCAGAGTCAT CTCCTTGCAA ACTATTCGTA CTGCTACACG
ATAGAGCATG AAACGCTCGG CATGTATCTG CTGAACCTTC GTGAAACCGC CATGGATTCG
ATCGAAATGA TGACCGGGAC CCGGGTCATG TCGGCGTATG TGGTTCCCGG CGGCGTCCGT
GAAGATTTAT CCGCGGATGA CGCCGCCAAG ATCCTTGAAG CAACCTACCA TATCGAGACT
GAACTGAAAC GTTTCGTAAA GATGTTCGAG ACCGGGCCGA TGATCGGTCT TCGGTCGAGA
GGTATTGGTG TTCTCTCCAT GGAAGATGCT TTGGCGTCGG GCGTGGTTGG TCCAACCGCC
CGTGCGACAG GTCTTCCCCG CGACGCCAGA AAGGATGATC CTCTGTATCT GGAGATGGGC
TGGCATATGA TTACCAGGAC GGAAAGCGAT AACTATGCCA GGATCATGCT CAGATTCGAG
GAGCTTTTCC AGTCTTTGAC TCTTATCAGA AACGGTATCG CGGCCCTTGA GCCGGGAAAA
ATCCGGAACG GCGGGAGAAT GAAAGCGGGC CGCATCAAAC ACACTATCGA AGCACCGAGG
GGAGACCTCA CCTACGATAT CGAAATCGAC GATGCCGGTC AGGTGGTGTT CGTCTCAATC
CAGACACCTT CGATTCCCAA CATCGAAGTG GCGACCCATG CGATGATGAA AAATCTGGCG
TCTGCGGCTG ACGTAACATC GACGTTCATC AGCGCGGATC CCTGTATTGC CTGTGCGGAG
CGGTAG
|
|---|
| Protein sequence | MKKVVDVSLP VGPIHPCFKE PCRIKCETRG ERVVTTEVEL GYVKKGIEKI MIGRPWQETI
FLAERVCGIC SVVHNTVIVE ALEKISGITV PRRAELLRLI LNELDRIQSH LLANYSYCYT
IEHETLGMYL LNLRETAMDS IEMMTGTRVM SAYVVPGGVR EDLSADDAAK ILEATYHIET
ELKRFVKMFE TGPMIGLRSR GIGVLSMEDA LASGVVGPTA RATGLPRDAR KDDPLYLEMG
WHMITRTESD NYARIMLRFE ELFQSLTLIR NGIAALEPGK IRNGGRMKAG RIKHTIEAPR
GDLTYDIEID DAGQVVFVSI QTPSIPNIEV ATHAMMKNLA SAADVTSTFI SADPCIACAE
R
|
|---|
| |