Gene Mlab_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0558 
Symbol 
ID4795401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp532306 
End bp533517 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content58% 
IMG OID640099216 
Productribulose 1,5-bisphosphate carboxylase large subunit 
Protein accessionYP_001029999 
Protein GI124485383 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0297277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATT TAATTGCCAC GTATTACTTC AAACCAAAAT CGGGAGTGAC TCCTGAATTT 
GCAGCCCAGG CGATCAGCGA GGAGCAGACG ACCGGGACCT GGACCGATAT TTCGACCGTG
AACGAGAAGA CCGCTTACGT TCACGCCTTC GACGGCGAGG TTCTCGAGAT CGTTCCGTCG
GGCGAAGGTT TCGAAACGAA ACTACGTTAC CCATATGAAA TTTTTGAGCC GGGAAACATC
CCCCAGTATC TCTCGGTCAT TGCAGGGAAC CTGTTCGGTC TCGGCAAACT CGAGGCCGTG
CGCCTTCTCG ACATCGATAT CCCCAAGGGT CTTGACGGAA CCGGGCCAAA GTTCGGGATC
GAGGGGGTCC GCAAACTCAC CGGTACCGAA ACGACCCGCC GCCCGCATGT CGGGACGATC
ATCAAACCGA AGGTCGGCCT GACCCCGAAG GACACTGCCG CCGTTGCTTA TCAGGCAGCG
ATCGGCGGTG TCGATCTGAT CAAAGACGAC GAGACGCTGA CCGATCAGAA GTTCTGTCCG
CGCATGGAAA GACTGGAGAT GGTCATGGAA GCGCTCGATA AGGCAAAGGA CGAGACCGGC
CGGCAGGTTT TGTATGCGCT GAACGTGACG ACGGGCGGGG ACCGGATCCT CGAGGCCGCT
TCCAACGCCG TGAGGATGGG AGCAAACATG ATTATGGTCG ATGTTCTGAC AGCCGGTTTT
TCCGCGGTCC AGTGCCTTGC ATCCGATCCC TCGATCACGG TTCCTATCCA TGTCCACCGG
ACGATGCATG GTGCGCTGAC GAGAAATCCC GTCCACGGTA TTGCGATGCG GCCGATTGCA
AAACTGGTCC GTGTCTGCGG CGGAGATCAG CTTCACACAG GTACGGTTTC CGGCAAAATG
GGTGGAAAAG CTGCCGAGAT CCTTGGAGAC AACGCGGCTC TGACCCGGCC TGCGGGAGAT
CTTCTTCCGG TCTTCCCGGT GGCCTCAGGC GGTCTTCACC CGGGAAAAGT CCACGCCGAG
ATCACTACGC TTGGAAACGA GATCGTTCTT CAGGCGGGCG GCGGGATCCA CGGTCATCCT
GACGGAACGG CTGCCGGGGC CCGTGCGATG CGGCAGGCAG TGGATGCGGC TCTTCTCGGC
GTGAGTGCCG AAGAGTATGC CAAGACGCAT GCCGAGCTTC GAAAAGCACT GGAGAAATGG
GGTTCAGCCT GA
 
Protein sequence
MNDLIATYYF KPKSGVTPEF AAQAISEEQT TGTWTDISTV NEKTAYVHAF DGEVLEIVPS 
GEGFETKLRY PYEIFEPGNI PQYLSVIAGN LFGLGKLEAV RLLDIDIPKG LDGTGPKFGI
EGVRKLTGTE TTRRPHVGTI IKPKVGLTPK DTAAVAYQAA IGGVDLIKDD ETLTDQKFCP
RMERLEMVME ALDKAKDETG RQVLYALNVT TGGDRILEAA SNAVRMGANM IMVDVLTAGF
SAVQCLASDP SITVPIHVHR TMHGALTRNP VHGIAMRPIA KLVRVCGGDQ LHTGTVSGKM
GGKAAEILGD NAALTRPAGD LLPVFPVASG GLHPGKVHAE ITTLGNEIVL QAGGGIHGHP
DGTAAGARAM RQAVDAALLG VSAEEYAKTH AELRKALEKW GSA