Gene Mlab_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0556 
Symbol 
ID4795472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp530446 
End bp531270 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content52% 
IMG OID640099214 
Producthypothetical protein 
Protein accessionYP_001029997 
Protein GI124485381 
COG category[R] General function prediction only 
COG ID[COG4087] Soluble P-type ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0176824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTG GGATAGTTTT TGATAGTGCC GGAACGCTTC TGAAAACGAA TCGTGCCGTC 
AAAAATATTA AAAGTGAAAC ACTGCTGAAC GACAGCCCGG AAACAACCAT GCTGACCTTC
GAGGATCCCG ACCGGATCCT TGTCCTTTTG AATGTCAGCT CAAGCGGCAT GATGAAAATC
CCGCCGGAAA AAAACCTTTC AACATATCTG AAAGAGGCGG ATGTGGTATT CGGCATAAGC
TGCGGAAGAA AAATCATCGA TGCCGAATGC GTGGGAACGA TTCTTTTTTC CGATCCCGTC
TGCCGGGTTG CCGACCTGCA GGATGTCATC AAAGCCTGCT GGCATATCGT GTCCAAAGAA
GCCGAATCGT TTGCAATGAA TACCGGCGTC ATCGTCAATC TCCGGACAAA CGAGATCGAG
TTCACGCTTG CAGCCGCCGG CTATCCGTTC CCGGGAGTCC GGGAAATGAT CTCCATGCTT
CACCAGAAAG GAGTTGCGGT CTACATCGCT TCAGGCGACC GGACCTCGAA ACTGGAACTG
ATCGCGGACA AGATCGGGAT CCCGCGGGAA CGTGTCTACG GCGTAGCAAC GCCGGTGACG
AAAGCCCGGA TCGTGACCAG CCTCAAAAAT GACTACGACA TTGTCGTCAT GGTCGGGGAT
GGGATCAACG ACCTCTCGGC TATGCGGGCT GCCGATGTTT CGATCCTGAC ATTACAGCAG
AAAGGGGAGC GGCCCGAAGC CCTCCTTAAA CAGGCGGAAT ACATAATAGA CGACATTCGG
GACGTAACCG GCATCGTGGC CAAATTCAAT ACCGATGATG AATAA
 
Protein sequence
MTVGIVFDSA GTLLKTNRAV KNIKSETLLN DSPETTMLTF EDPDRILVLL NVSSSGMMKI 
PPEKNLSTYL KEADVVFGIS CGRKIIDAEC VGTILFSDPV CRVADLQDVI KACWHIVSKE
AESFAMNTGV IVNLRTNEIE FTLAAAGYPF PGVREMISML HQKGVAVYIA SGDRTSKLEL
IADKIGIPRE RVYGVATPVT KARIVTSLKN DYDIVVMVGD GINDLSAMRA ADVSILTLQQ
KGERPEALLK QAEYIIDDIR DVTGIVAKFN TDDE