Gene Mlab_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0548 
Symbol 
ID4795760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp522836 
End bp523270 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content51% 
IMG OID640099206 
Producthypothetical protein 
Protein accessionYP_001029989 
Protein GI124485373 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.142286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGAGA TCGACAAGAA TTTTGAGGAG GCAATCGCCG AAGTACAAAC AAACGGGGCG 
AAACAGACAG CTGCCGACTG GCTCGCAAAG ATCGAAGAAG AGTATGGACG GTCTCCTCTG
ATCTATCAGA AACTTGAGGA CAATCCCGAA GCGCTGATCT CGCACCTTCT CTATAAAAAT
GCGGTGACAC GGGCCGGAGC ACTGCCGCCG AAGACGGTCG AACTCATCAG TCTTGCCGTC
GGTGCGGCAT TACGCTGCGA TCACTGTACA ACGTATCATA TGCAGGTCGC AAAAAAGATG
GGTATCACCA AAGAAGAAAT CTTAGAGGCG GTACTGATTG CTGGTCTTCT TGCAAACTCC
TCGGTTCTTG CAAATGCCTA CCGTCTGGTC GTGCCGGAAA AGGAACCCTG CGCAGGGACC
TGCGCTATGC AATAA
 
Protein sequence
MVEIDKNFEE AIAEVQTNGA KQTAADWLAK IEEEYGRSPL IYQKLEDNPE ALISHLLYKN 
AVTRAGALPP KTVELISLAV GAALRCDHCT TYHMQVAKKM GITKEEILEA VLIAGLLANS
SVLANAYRLV VPEKEPCAGT CAMQ