| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0543 |
|---|
| Symbol | |
|---|
| ID | 4795909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 518224 |
|---|
| End bp | 518787 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640099201 |
|---|
| Product | dCTP deaminase |
|---|
| Protein accession | YP_001029984 |
|---|
| Protein GI | 124485368 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.14508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0728196 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTGG TAGACTGGGA AATTGCAGAC CATATCAAAC GGGGGTACAT CGGCATCGAT
CCATTCGATC CGGCGCTTGT TCAGCCCAAC TCCCTTGATA TTCGCCTTGG TAACCATTTT
GTCTGGTATG AACCATGCGA TGATGTGATC GACCCTTATC AAAAGGAAAC GCTTCACACC
CATACACAAG AGAGAAAAGG ATCCTATTTT GACATTCAGC CGGGACAGTT CGTCCTTGCG
GAAACTCTGG AAACGGTGAC GCTTCCTGAT AATATCGTCT CTTCGATCGA AGGAAAGAGC
AGCGTGGCAC GCCTCGGCAT TGCCCTCCAT CAGACCGGCG GCTGGATCGA TGCAGGGTTT
TCAGGAACCA TCACCCTTGA GATGTGTAAC TCGAACTGCC GTCCCGTCCG CGTATATGCA
GGGATGCCGA TCGGCCAGCT CGTCTTCTAC GTGACCAAAC GCTGCGAATG CCCGTACGAT
AAAAAACCGG ATGCAAAATA TCAGAACCAG AAAAATGCGA CCATCTCGCG TTACGATAGA
AAGATGCTGA AAAACGTGGA GTAA
|
|---|
| Protein sequence | MILVDWEIAD HIKRGYIGID PFDPALVQPN SLDIRLGNHF VWYEPCDDVI DPYQKETLHT
HTQERKGSYF DIQPGQFVLA ETLETVTLPD NIVSSIEGKS SVARLGIALH QTGGWIDAGF
SGTITLEMCN SNCRPVRVYA GMPIGQLVFY VTKRCECPYD KKPDAKYQNQ KNATISRYDR
KMLKNVE
|
|---|
| |