Gene Mlab_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0516 
Symbol 
ID4796170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp490112 
End bp490600 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content56% 
IMG OID640099174 
Producthypothetical protein 
Protein accessionYP_001029957 
Protein GI124485341 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.643941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCG ACAAAGAGCT TTTCCGGAAG GGTCTCGTTT TGTTTGCGGC CCGGGATTTT 
TCCGGGGCGG CCGGATGCTT TACGGATGCG CTCTTGGAAA ATCCGGAGAA TGTGAACTAT
TATTATTACC GCGGCGTCTG CTATCAGGAG ACCGGCGCCG CAGGCGAGGC AATATCCGAT
TATACGAGTG CTCTTTCCCG CAGCCCGTCC GCATATCCGA TCCGGTATAA CCGGGCAGAT
CTTTTTCTGC AGGCCGGCGA TCTCGAAAAA GCACGAAAGG ATTTCGAGGA GATCCTCAGC
GACGCGGGAA AGGATGATCC CCACTGGTCG GCGCTTGCCT ATCTCGGCCG CGGTCTGATC
AGGCTCGAAG AGGGGGAGAT CGAGGAGGCG ATCATCGACC TCACGGCCGC GGAGGATCTT
GCACGACTTG ACGGGGATAA ACTGCTGCTC GCAAGAATCG GCGACGAGCT GGAGAAAAGC
GGGTTTTAA
 
Protein sequence
MNTDKELFRK GLVLFAARDF SGAAGCFTDA LLENPENVNY YYYRGVCYQE TGAAGEAISD 
YTSALSRSPS AYPIRYNRAD LFLQAGDLEK ARKDFEEILS DAGKDDPHWS ALAYLGRGLI
RLEEGEIEEA IIDLTAAEDL ARLDGDKLLL ARIGDELEKS GF