| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0502 |
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| Symbol | |
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| ID | 4796173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanocorpusculum labreanum Z |
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| Kingdom | Archaea |
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| Replicon accession | NC_008942 |
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| Strand | + |
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| Start bp | 473238 |
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| End bp | 474464 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640099160 |
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| Product | pseudouridylate synthase subunit TruB |
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| Protein accession | YP_001029943 |
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| Protein GI | 124485327 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1900] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03287] putative methanogenesis marker 16 metalloprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC TTGCAGAAAT CAACCGGAAA ATTGCCGACA AAACCGCAGT CGTCATAACG
GCCAAAAGCC TCAAGGAACG TATCCGAAAA GGGGAGATAA TCACCCCGGA TGATGTTGAC
GTGGTGACCT GCGGAACATT CGGGGTGATG TCTGGAACAT CCGCGTTTCT CGCATTCCAA
GCCGGGACGC CTGGAACCTT CCGGCATGTC GTCTCCATGA CGCTGAACGG AGTTCCGGCG
TTCATCGGCC CCTGCCCGAA TGAAAGCAAC GGACATGTAG ACTGTATTAT ATACGGAACG
TCCCGTGCGG AGCAGAATCC CTCATACGGC GGCGGACACC TTTTTTCGGA TCTTGCCGCA
GGAAAGCCGG TCACTGCCGA GATCATCACC GACACGGGAA CGATCCGCCG TCTGGTCAGT
GTGGATGATA TGTCCGCAGC CAGGCTGATC GTCACCCGCG GAGGATTCAA AAACTACATG
GGGTTTGTGA ACCGGAGTGA AGAAGAGATC TCCACGATTT TTTCCACGTT CCCGATGAAG
CCAAAGATGC AGAGCGCGTC CGTTTCCGGA TGCGGGGAGA TCAATCCGCT CGAAAATGAC
CCGAAGTTAC GCTATCACGT CCCCGGGGCA TCGGCACTCG TGAACGGCAG TCCCGCTCTG
ATTCTCGGGT GCGGGACGAG ATCGTCGCCG GAGAAACCGA ACCTTTCGTT GTCTGCGGAC
ATGCAGGGTA TGCATCCCGA CATGATGGGC GGTTTTGTGA CCGCGCTCGG CGCCGAATGC
CTGACTTCAA TTGGGACCGC GATCCCTGTA CTGGATGACG AAACGATGGA CGCTCTCCGC
ATTCTCGACG AGGATATCCC CCTCCCGGTC GCCGACATCC AAAACAGGAC ACCCTTTGCC
GCCGCGACCT ACGCGGATGT CTGGCAGAAC ACCGACGGAA GAGTCCGCGT CGATGCTTCG
CGCTGCGTAA ACGAATGCAC GGAATGCGCA AAAGATCTCT GCCCGGTCGC GGCTATAAGA
CCCGACCTCT CGATCGGCAA AGCATGCATG GGATGTCTGA CCTGCATAAC CGTCTGCAGA
CATCAGGTGT TTTCCGCAAA CGCGGGAACA CTGCATATTC CCGATGCGGA TATTCGAATC
GGTCTTCGCC AGTCCGACCG CGTTCGGGGA AACCGGGCCG CTGCCCTGGT CCGCGACCGG
ATCTCTTCCG GCGCATGGAG GTTTTAG
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| Protein sequence | MKTLAEINRK IADKTAVVIT AKSLKERIRK GEIITPDDVD VVTCGTFGVM SGTSAFLAFQ
AGTPGTFRHV VSMTLNGVPA FIGPCPNESN GHVDCIIYGT SRAEQNPSYG GGHLFSDLAA
GKPVTAEIIT DTGTIRRLVS VDDMSAARLI VTRGGFKNYM GFVNRSEEEI STIFSTFPMK
PKMQSASVSG CGEINPLEND PKLRYHVPGA SALVNGSPAL ILGCGTRSSP EKPNLSLSAD
MQGMHPDMMG GFVTALGAEC LTSIGTAIPV LDDETMDALR ILDEDIPLPV ADIQNRTPFA
AATYADVWQN TDGRVRVDAS RCVNECTECA KDLCPVAAIR PDLSIGKACM GCLTCITVCR
HQVFSANAGT LHIPDADIRI GLRQSDRVRG NRAAALVRDR ISSGAWRF
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