Gene Mlab_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0458 
Symbol 
ID4794695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp436212 
End bp436847 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content51% 
IMG OID640099115 
Producthypothetical protein 
Protein accessionYP_001029899 
Protein GI124485283 
COG category[K] Transcription 
COG ID[COG1675] Transcription initiation factor IIE, alpha subunit 
TIGRFAM ID[TIGR00373] conserved hypothetical protein TIGR00373 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.848866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCA TCACAGAAGA GCAACTCGGG AATCCGGCAA TCTATCAATA TCTGCTCAAA 
CTAGTCGGGG AAGAGGGTCT TGAACTCCTT CGCCGCTGGT CAGATGTATC CTATGCACGC
AGATGGGTGG AGGAAAAGCT GAGCAGTGAA GATCTTAAGG CAGCCGACAA AGCACGGTTC
CTTGCCGAAT CAAGACGTTC CGACGAGGAT CTTGTCGAAG CGGAACGCAG CGACGAGGAG
ATCGCCGAAC TCACCGGCAT CAATCTGAAC TCGGTTCGCC ACACTCTCTA TAACTTATAT
GAACACCGTC TTGCTGAATA CCGCAGGATC AAAAACAACG AAACCGGCTG GCTCACCTAT
CTTTGGCTTA TGCGTATGGA TCATATGAAC ATGGTTCTGC GTAACGAGAT GGAGGTCGCA
GCGGGAAAAC TGGCGGGCAG ACTGAGATAC GATGAGGCCA ACGACTTTTA CCAGTGTAAA
AACTGCGGTA TCACGACGAC CTTCAATAAT GCCATGACGA CCAACTTCTC CTGCCCTCAG
TGCGGAACGA TGCTGGTGCA TTTCGATGAC GAACTGATCA TCACGGCCTT GAAAAAACGC
CTTGCCAAGA TGCAGACCGC ACTTGATAAT GCCTGA
 
Protein sequence
MTVITEEQLG NPAIYQYLLK LVGEEGLELL RRWSDVSYAR RWVEEKLSSE DLKAADKARF 
LAESRRSDED LVEAERSDEE IAELTGINLN SVRHTLYNLY EHRLAEYRRI KNNETGWLTY
LWLMRMDHMN MVLRNEMEVA AGKLAGRLRY DEANDFYQCK NCGITTTFNN AMTTNFSCPQ
CGTMLVHFDD ELIITALKKR LAKMQTALDN A