Gene Mlab_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0440 
Symbol 
ID4794659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp424244 
End bp424810 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content49% 
IMG OID640099099 
Producttranscription factor 
Protein accessionYP_001029883 
Protein GI124485267 
COG category[K] Transcription 
COG ID[COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGGA AAACATACTC CTCTCTGAAG ATTGAAAATA TCGTCGCCTC CGGCGTAATT 
GCCGAAGAAA TTGATCTTGC AGAGATCTCC GAAAAAATTG ACGGGTGTGA ACTCAATACA
AAACGTTTCC CCGGTGCAGT GTATCGTATC GACAGTCCGA AAATGGCATC GCTGATCTTC
TCGTCGGGAA AGGTCGTGCT TACCGGAATC AGAAATGAAG AGTCGCTGGG AGAAGGTCTC
GCAAAGGTGC TTGCCTCCCT GAAAGAAGCA GGCGTAAACG TGCTGGATGT CCCGCGGGTC
GCCGTGACCA ACATAGTCTG TTCCTACGAC ATCGGTCGGT TTATCAACCT GAACCGTGTG
GTCGCAACCC TCTCTCTCGA AGCCATCGAG TATGAACCCG AGCAGTTTCC GGGTCTCGTA
TACCGTATCA AAGATCCGAA AATCGTTGCA CTGCTCTTCT CGTCTGGAAA GATCATCTTA
ACCGGCGGTA AGAATCTTGA CGATGTCAGA AAAGGTCTGG ACTTCCTCGA AGAGAGTCTC
AAAGACGTCC TGACCGAACA AAAATAA
 
Protein sequence
MDGKTYSSLK IENIVASGVI AEEIDLAEIS EKIDGCELNT KRFPGAVYRI DSPKMASLIF 
SSGKVVLTGI RNEESLGEGL AKVLASLKEA GVNVLDVPRV AVTNIVCSYD IGRFINLNRV
VATLSLEAIE YEPEQFPGLV YRIKDPKIVA LLFSSGKIIL TGGKNLDDVR KGLDFLEESL
KDVLTEQK