Gene Mlab_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0418 
Symbol 
ID4794475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp398394 
End bp399485 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content50% 
IMG OID640099071 
Producthypothetical protein 
Protein accessionYP_001029861 
Protein GI124485245 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00299596 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATTT CCAGGATTTC CCTCTATCTG GGAGCTTTTG CGACCATGGC TCTCTCGAAT 
GCCGTTGTCC CGGTTCTGGC ACTGATTACG TCGGATGCCG CGGTTCAGGG AGCCATCTAC
TCTGCCTACT TTTTAGGCGC GTTTTTCATG GTATTTCCTG CCGGATGGAT ATCCGATAAA
ATCGGACGCG CTCCGCTCAT CAAGATCGGT CTGGCGGGAA CATTTGTTTC CGGGCTCCTT
ATCTGGTATT TTACAGACGA TCCTCTTTTG ACCGTCGGAT TCAGATTCCT GGAGGGTTTG
TTTACCGGCA TGTTCGTATC ATCGTCTCTC TCCTATGTCA ATTCACAGAT TGATCATACA
AAACTCTCCG GTCTGTATCT TGCACTGATG AATGTGGGTA TGGTCGCGGG TCTTGTTATC
CCCGGCATCT TATCGGTTAT CCATCCGTAT GCCGGCGTGT TTGTGTTCAG CGTTCTGACC
GGATTCGCAT TTTTTGCAGG GATATTCTTC CGTGAAGGCT CCGGTTTTGT CTCTGTAAAG
ATACCGGTTC GCATGATCTT TTCGATCGCA CTCTATCACA AGTGGCTCTG GGTTGCTCTG
TTTATTTTCA CAGGAGCGAC CGGTGTCGTC ACGAGTATGT ATCCGGAGAT GTCGGGGTCT
TCTGCAGAAA TTTCCGGAGT CGTGACTGCG CTGATGAGTG TGTCTACTGC TGTCTGTGTT
TATGCTGTAT CACGGTTATC TCTTCAGGAT TCTCTGGGAT TTCTCCGGCG TTCGGCATTC
ATCCTTGCCA TCTCGGTTCC TCTGGTTTTC TTTACGCCGA TCGGCATGAT CCTTGTCGGT
GCCGTTTTTG GCATAATCTC GGTCGCAGTT TTGAATTATA TCGCGGGCAC TCCTCATCCC
CAGGGTATGA TGAATGGTCT CTTAATAACG ATGCAGTATG CCGGGATGGC GGTATTGCCG
TTTATTACCG GTTTGATCGT TATTCCCCTG GGATATCTGG GTGTATTCAT TATTGTTGGG
GCGTGCGTGC TGCTCGGCGG ACTCCTTGTC GTCCGCTGTC CGTGTTATGC TCCTGCAGTA
AAAAATGGGT AA
 
Protein sequence
MNISRISLYL GAFATMALSN AVVPVLALIT SDAAVQGAIY SAYFLGAFFM VFPAGWISDK 
IGRAPLIKIG LAGTFVSGLL IWYFTDDPLL TVGFRFLEGL FTGMFVSSSL SYVNSQIDHT
KLSGLYLALM NVGMVAGLVI PGILSVIHPY AGVFVFSVLT GFAFFAGIFF REGSGFVSVK
IPVRMIFSIA LYHKWLWVAL FIFTGATGVV TSMYPEMSGS SAEISGVVTA LMSVSTAVCV
YAVSRLSLQD SLGFLRRSAF ILAISVPLVF FTPIGMILVG AVFGIISVAV LNYIAGTPHP
QGMMNGLLIT MQYAGMAVLP FITGLIVIPL GYLGVFIIVG ACVLLGGLLV VRCPCYAPAV
KNG