Gene Mlab_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0396 
Symbol 
ID4794681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp372850 
End bp373509 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content52% 
IMG OID640099048 
Productaldehyde ferredoxin oxidoreductase 
Protein accessionYP_001029839 
Protein GI124485223 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.179937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACAT TTAACACGAT CGAAGAGGCC CTGAAATCCC TTCAAAACGG AGAGATGATC 
ATCGTCACCG ATGATGAGAA CCGAGAGAAC GAAGGTGACC TGATCTGTGC CGCCGAATAT
GCCACGACGG AAAATGTCAA CTTCATGGCA AAATACGGCA GAGGGCTGAT CTGCATGCCG
ATGGGACGCA GTCTCGTCGA AAAACTTTGT CTCCCGCCGA TGGTGCTCAA AAACACCGAC
AACCACGAAA CGGCATTCAC GGTCTCCATC GATCATGTCG ATACCACTAC AGGCATCTCG
GCGGTTGAAC GCGGCATCAC CGCACGGAAA TGTATCGACC CAAACGCACG GCCGGAGGAT
TTTCGAAGAC CCGGCCATAT GTTCCCGCTG CAGGCAAAGG ACAATGGTGT ATTCGAGCGT
GAGGGACATA CGGAAGCAAC CGTCGATCTG ATGAAACTGG CAGGACTCAG AGAAGCAGGA
CTCTGCTGCG AGATCATGGC GGACAACGGT GAAATGATGC GGACCCCTGA GCTTATTTCG
ATGGCCAAGC AGTATAACTT AACCTTTGTG ACCATCAAAG ACCTCCAGGC CTACCGGAGA
AAGCAGGAAG CTTCGGCTCT TGCCGTTGAA CAGAAAAATA TGAGTCCAAT GGACTGTTAA
 
Protein sequence
MFTFNTIEEA LKSLQNGEMI IVTDDENREN EGDLICAAEY ATTENVNFMA KYGRGLICMP 
MGRSLVEKLC LPPMVLKNTD NHETAFTVSI DHVDTTTGIS AVERGITARK CIDPNARPED
FRRPGHMFPL QAKDNGVFER EGHTEATVDL MKLAGLREAG LCCEIMADNG EMMRTPELIS
MAKQYNLTFV TIKDLQAYRR KQEASALAVE QKNMSPMDC