| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0335 |
|---|
| Symbol | |
|---|
| ID | 4795121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 315824 |
|---|
| End bp | 317425 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640098984 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001029778 |
|---|
| Protein GI | 124485162 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCTT TGCTTCGTTT TCTGTGTACA CTAAAAGGAG GCAGGATACC CGGCATAAGT
CTGGCAGTCC TCCTCCTCTG TTTTTGTCTA GTCTGCGTGC CGGTTTTGGC TGATTCTGAT
CTCGGCCCGA TACCTGACGC TCGTTCAAAT CCCGCAGTAA GTGCTGATGT CGAGGCATTT
TTTGACGCAT CGATCCCGGC AGAACTCGCA AAATACAATA TACCCGGCGC GACGGTCGCA
GCAGTATATG ATGGAAAACT GATCTTTTCC AAAGGATACG GGTATGCTGA TATCGCCAAC
AGAACACCGG TCGATGCTGG ATCGACACTC TTCCATATTG GTTCGGTCAC GAAACTTTTC
ACCTGGACAT GTGTTATGCA GCTGGTGGAC GAGGGAAAAA TAGACCTGGA TGCAGACATC
AACACCTACC TTGCCGATTT TTCTCTTCCG GACACCTACC CCGGCCAGCC GGTCACTATG
CGAAACCTGA TGACGCACAC TGCCGGATTT GAAGACGCAA TCCGGAGGGC TACAGTTGAA
GACGTAGATG ATCTTTTCTC ATTCAGGATC TACTGCCGGG ATTATATACC TGCACGGGTC
TATCCTCCGG GAACCGTGAC CTCCTACTCA AATTACGGCA CAACGCTTGC AGCCGTCATT
GTTGAGGATG TAAGCGGCAT GCCGTTTGAA CAGTATCTCC AGGAACATAT CTTAACCCCG
CTTGATCTCA AAAATACCCA TCTATCCTAT CTCCTCCCGC CAGAATCCGC CGGCAGCCTC
TCCTCCGGAT ATAATTATAT CGGCGGGACA AATGCAGCGA TCACCGACAC GATTTTTGTC
ATCGGACCTG CCGGATCCAT CAGCTCCACA GCAGAGGATA TGGCAGTTTT CCTTGCCGCA
CATATGCAGA ACGGAAAAGT GAACGGCGCA GAAATTCTTT CTGAACCGGC CGCCGCACTC
ATGCATGCAA GAGCATTTAC AAATGACCCG CGGGTCAGCG GCATCTGCCT TGGATTTTAT
GAAAACTATC TCAATGGCGA GCGGATCATC CTCCACGGCG GAGATACCAA TACCTTCCAT
TCGCTTTTCG TTATCATTCC TGACAAAAAA ACCGGGTTTT TTGTCTCATA CAATGCTCCC
GGAGGGACAA GTGCACGAAA TGATCTGCTT CTCGAGTATG TCGGCCGATT CTTCCCCCTA
ACGGAGACGG AGACGGTGAC GCAGGAAATA GAACATTCCG GATCATTTGA GAAGTATACA
GGAGTTTATC AGTCAAACCG CCATAATTAC CGGACGTTTG AATTTTTCCT TCAACCTCCG
CAGCAAATGA CGGTTGAAGC GGGAGAAAAT AATGCCTGCC TTGTGTTAAA TATTGATGGC
GACTCTACAG AATACATCGA GGTTTCACCC GGCGTCTTTC AAGAGAAAAG CGGCGGCCCG
TCAGTGTATG GAAATATGGT CTTTCGGGAG AATGAGAACG GTGATGTGAC GTTCCTCTGT
TCCGAAAATA CGCCGGTGCT CGCATATGAA CGGGTCCCAT GGTATTCTGT CAATACGTTT
ACGTCCGGGC TCCTCTCTGC TTTGAATGGT TCAACAACAT GA
|
|---|
| Protein sequence | MISLLRFLCT LKGGRIPGIS LAVLLLCFCL VCVPVLADSD LGPIPDARSN PAVSADVEAF
FDASIPAELA KYNIPGATVA AVYDGKLIFS KGYGYADIAN RTPVDAGSTL FHIGSVTKLF
TWTCVMQLVD EGKIDLDADI NTYLADFSLP DTYPGQPVTM RNLMTHTAGF EDAIRRATVE
DVDDLFSFRI YCRDYIPARV YPPGTVTSYS NYGTTLAAVI VEDVSGMPFE QYLQEHILTP
LDLKNTHLSY LLPPESAGSL SSGYNYIGGT NAAITDTIFV IGPAGSISST AEDMAVFLAA
HMQNGKVNGA EILSEPAAAL MHARAFTNDP RVSGICLGFY ENYLNGERII LHGGDTNTFH
SLFVIIPDKK TGFFVSYNAP GGTSARNDLL LEYVGRFFPL TETETVTQEI EHSGSFEKYT
GVYQSNRHNY RTFEFFLQPP QQMTVEAGEN NACLVLNIDG DSTEYIEVSP GVFQEKSGGP
SVYGNMVFRE NENGDVTFLC SENTPVLAYE RVPWYSVNTF TSGLLSALNG STT
|
|---|
| |