| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0235 |
|---|
| Symbol | |
|---|
| ID | 4795606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 220069 |
|---|
| End bp | 221079 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640098881 |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_001029678 |
|---|
| Protein GI | 124485062 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTC GTATCGCTGT CGTGAACGGG GATGGTATCG GGCCTGAGGT TATCCCTGAA
GCTCAAAAGA TTCTTGAGCA TTTTCTTCCC GATGCGGATT TTTATGAGGT CGAACTCGGC
CTTGCCAAAT GGGAGAGAAG CGGGTCCGCC TGTTCCCCGG ATGATATTCG TGAACTGAAA
GGGGCAGACG CGATTTTATT CGGGGCCGTG ACAACCCCTC CTGACCCGAA TTACCGGAGC
GTTCTTTTGC AGATCAGACA CGAACTCGAT CTGTATGCAA ATCTTCGTCC CATCAGACCC
CTTCGTTCAT CGGGCCAAGG GTCACCCGCC GATATGATGA TCGTCCGGGA GAATACCGAG
GGACTTTATT CAGGCATCGA GGAGATTGGT GAGGAGAGGT CGACGACCCT CCGTGTGGTG
ACGAAGGCAG GTTCCAAACG AATTGCAGAG AAAGCCTGCT CTCTTATTTT GGAACGAAAT
TCTAAAAGTC CGCTCGTTAT CGGATACAAA GGGAACGTGC TTAAATCGGA TCTGCTTTTC
AGGGATACCT GCAGCGAAGT CGCTGCGTCA TTTGGGATAC AGACAAAAGC GGTGTTTATC
GATGCTTTGT GTCTTGATGT TTTGCAGCAT CCGAAAAATT ATGATGTGAT CGTTACGACA
AACATGTTTG GTGATATCTT AAGCGATGTC TGCGGGTATC TCACAGGAGG ACTTGGCATG
CTTCCGAGTG CGAACATAGG GGATACGCAT GCATTTTTCG AGCCGGTCCA CGGGAGTGCT
CCGGATATTG CCGGTAAGGG TATAGCAAAT CCAGTTGCTG CGATCCGAAG TGCGGCAATG
ATGCTTGAGT ATTTCGGGAT GAAACGTGAA GCTTGCCTCG TCGAAGAATC GATTGCCGAT
TTGATTAACA GCGGTGTATG CACGCCCGAT CTTGGAGGCT GTGAATCAAC TTCATCGTTC
GGCAACCGTT TGCTTGCAGC CGTCTGTAAA AAAGAAGAGA GACAAATATA A
|
|---|
| Protein sequence | MSLRIAVVNG DGIGPEVIPE AQKILEHFLP DADFYEVELG LAKWERSGSA CSPDDIRELK
GADAILFGAV TTPPDPNYRS VLLQIRHELD LYANLRPIRP LRSSGQGSPA DMMIVRENTE
GLYSGIEEIG EERSTTLRVV TKAGSKRIAE KACSLILERN SKSPLVIGYK GNVLKSDLLF
RDTCSEVAAS FGIQTKAVFI DALCLDVLQH PKNYDVIVTT NMFGDILSDV CGYLTGGLGM
LPSANIGDTH AFFEPVHGSA PDIAGKGIAN PVAAIRSAAM MLEYFGMKRE ACLVEESIAD
LINSGVCTPD LGGCESTSSF GNRLLAAVCK KEERQI
|
|---|
| |