Gene Mlab_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0234 
Symbol 
ID4794767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp219596 
End bp220072 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content51% 
IMG OID640098880 
Producthypothetical protein 
Protein accessionYP_001029677 
Protein GI124485061 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATAT CTGGACATGC CGTTGTGATC GGGGAGGATG TGGATACCGA CATGATCATC 
GCCGGTCGTT ATCTTAGGAC GATCGACCGG TCGGTGTGGG TGGAGCATGC CTTCGAAGAT
TATGATAAGA GTATTGCCGG ACGACTGAAC GGCGCCGTGT TGGTTGCCGG GAAAAATATC
GGCTGCGGAT CATCCCGCGA GCAGGCTGCT GCTGCTCTCA AGGAAGCGGG GGTACGTGCC
GTCGTCGCTC CGTCTTTTGC GAGGATCTTT TTCCGAAACT GTGTTAATCT TGGATTGTAT
GTCTTTGAGG CGGATGTTGT GTGCGAAAAT GGTGATATCA TTTCCTTTGA CACCGATGAT
TCGTATGTCA AAACATCAAA TGCCGTTTAT CAGGCAAAGC CGCTCTCGAA CCGTATGAAG
GAGATACTGT CTGCTGGTGG GCTGAATGCC TATCTCTCCA TGCAGGGTGA ACCATGA
 
Protein sequence
MIISGHAVVI GEDVDTDMII AGRYLRTIDR SVWVEHAFED YDKSIAGRLN GAVLVAGKNI 
GCGSSREQAA AALKEAGVRA VVAPSFARIF FRNCVNLGLY VFEADVVCEN GDIISFDTDD
SYVKTSNAVY QAKPLSNRMK EILSAGGLNA YLSMQGEP