Gene Mlab_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0225 
Symbol 
ID4795656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp211278 
End bp212108 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content50% 
IMG OID640098871 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_001029668 
Protein GI124485052 
COG category[F] Nucleotide transport and metabolism
[S] Function unknown 
COG ID[COG3613] Nucleoside 2-deoxyribosyltransferase
[COG5418] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATCC TCGCTTCACC CTGTGTTTTG CATGAAAATC TTCGTGCTGA CGGCATTACA 
ACCGATGAAG ACCGTGAGGT TTTCATAAAA TGCAGAAAAA GATGCGAGGA GTTCGGTATC
GATATTGTTC CGCTGCCGTG TCCGGAGACG CTGTATCTTG GAACTCCCCG ATCCCCCGGG
TCATTTACCG AAAGGCTTGA TACCCCGGAG TTTTCGGCTC TTCTCGATCG ATTGGAGGAG
GAGGTAAGGG ACCTGATTTC GGTGAAAGGC GAGCCTATCT GCATTCTTGG CGTAAACTCA
TCTCCGACCT GCGGGGTAAC AACCACATAT TTCACGAATG AGAAGTCTGT TGGTCCGGGT
GTTTTTCTGA AAAGATTCTC CCACTTCTGC GCGGTTGACG CTCGTGTTTT TGCAAAATAC
CGGATATATC TGGCATCGCC GCTTTTTTCG GAGGCCGAAC GCCGGTATAA TGCCTATCTT
GTTGAAGTTC TTCGACAGAA TTTCTTTTTC GTGTATCTCC CTCAGGAGGC CGCTGACACC
GAAGACGGTA GAGAGGGATC CCGTGAACAA ATTATCTATG AAAAAAATCT ATCTGAACTG
AAAAGAGCGG ATATCGTTGT CGGGGTCATC GACGGATCGG ATGCGGATTC TGGGACCGCC
TGGGAAATGG GATATGCATT TGCATCCGGA AAACGGGTGA TAGCTCTCAG GACGGATTTC
CGGAAGTTCA GCGGGAATGA ACGGGTGAAT CTCATGCTCG AGATGGAGGC AGAGGTCGTT
TTGAACGTCG ACGAACTCGT TTCGGCACTG GGCTTTCATC CGCTTCCCTG A
 
Protein sequence
MFILASPCVL HENLRADGIT TDEDREVFIK CRKRCEEFGI DIVPLPCPET LYLGTPRSPG 
SFTERLDTPE FSALLDRLEE EVRDLISVKG EPICILGVNS SPTCGVTTTY FTNEKSVGPG
VFLKRFSHFC AVDARVFAKY RIYLASPLFS EAERRYNAYL VEVLRQNFFF VYLPQEAADT
EDGREGSREQ IIYEKNLSEL KRADIVVGVI DGSDADSGTA WEMGYAFASG KRVIALRTDF
RKFSGNERVN LMLEMEAEVV LNVDELVSAL GFHPLP