Gene Mlab_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0193 
Symbol 
ID4795772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp180941 
End bp182182 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content51% 
IMG OID640098839 
Producthypothetical protein 
Protein accessionYP_001029636 
Protein GI124485020 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00183424 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG AAAACACATC GCTCTGGCAG AAAATCTACT CGCCGATGAT CCTCTCCCTT 
GCGGTCAGAA ACCTGAAACT GAACAAATTC AGAACCATCC TTTCGATGAT CGGTATCGTG
ATCGGCGTTT TCGCCATCTG CGGTATGGGA ATGATCAGCG CAGGGTTCAC CGAAGAGATG
AACTCAATGA TCTCCGACAC TGCAGACACG CTGACGATCA CCCCGATCGG CGAGAAAGTC
ATCGATGGAA CGACAACGAC GGGCTTCTCC ACCAAGGATC TTCGAGACAT AGAGTCTGCG
GTAAAATCGG TCACCAAAGA ATACGAATTC ATTCCTATGT ACTCATCGAG TAAGTACATA
TATATCGGAA AGGAGACCAC CATGGCCACG ATATCCGGAA TGGATTCAAG CGACATCACA
AAGCTTGCAA CGCTGATCCA GGGAACCCTT CCGCGCGGAG CAACCAACGT TATCGTCGGC
GAGACGTTTG CCGAAGACAA TAATCTCAGG CTTGGAAGCC GGATGATCAT GCTCGATTCG
AGCGGTCAGG AAGTTACCTG CAGAGTTGTC GGTATCATGG AGGATACCGG ACAGCTGACG
TTCGGGTTCT CCACGAACAA TGCGGTCGTC GGTTCGATCG AGTGGTATAC CTCGCTCGTC
GGAGACAATC ACGGCCTGTA CGACAAGGTC ATCGTCAAAG CATACGATCC AACGGAACTG
AACGCGATCG ATGCCGCCAT CGAGAAGAAG ATGAACGGCA AGGAGGACAA AGACTCGGAT
GATACGGTCT ACATCCTGAA CTCGTATGAG ATCATGGCAG TCTTTGACGA CATCATGTCC
ATGTCCAGTA TCTTCACGAC GATCATCAGC GGGATTTCGC TTCTGGTCGC TGCTGTCGCA
ATTGTCAATG TGATGTTGAT GAGTGTGAAG GAACGGACAC GCGAGGTCGG TATTCTCAGA
AGTATTGGAA CCTACCGGAG CCAGATCCTG CAGATGTTTT TGTATGAAGC AGGACTCATC
GGTCTGATCG GGGCAATCGT TGGAACCGTG CTCGCACTGA TCGCAGCACC GATTATGCTG
ATGGCGATGA TCGGATCACT GGATGCGATG CTGACAGCGT CCGTTCTTGT CTATGTGCCG
ATCGGCATTC TCATCGGTTT GATCGTCTGC CTGATTTCCG GTCTTTACCC GGCTTGGAAA
GCAGCCAATC TCAATCCGGT CGAAGCAATG GCGACCGACT GA
 
Protein sequence
MSEENTSLWQ KIYSPMILSL AVRNLKLNKF RTILSMIGIV IGVFAICGMG MISAGFTEEM 
NSMISDTADT LTITPIGEKV IDGTTTTGFS TKDLRDIESA VKSVTKEYEF IPMYSSSKYI
YIGKETTMAT ISGMDSSDIT KLATLIQGTL PRGATNVIVG ETFAEDNNLR LGSRMIMLDS
SGQEVTCRVV GIMEDTGQLT FGFSTNNAVV GSIEWYTSLV GDNHGLYDKV IVKAYDPTEL
NAIDAAIEKK MNGKEDKDSD DTVYILNSYE IMAVFDDIMS MSSIFTTIIS GISLLVAAVA
IVNVMLMSVK ERTREVGILR SIGTYRSQIL QMFLYEAGLI GLIGAIVGTV LALIAAPIML
MAMIGSLDAM LTASVLVYVP IGILIGLIVC LISGLYPAWK AANLNPVEAM ATD