Gene Mlab_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0168 
Symbol 
ID4795862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp153118 
End bp154140 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content46% 
IMG OID640098814 
ProductDNA topoisomerase VI, B subunit 
Protein accessionYP_001029611 
Protein GI124484995 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCTA TTTTAGACAT CGAGGATTTA TCAGTCGGTT TTGATACCCA GGACGGAGAA 
ATTCAGGCTG TGAGAGGAGT AAGTTTCTCT CTGAAACGTG GGGAAATTCT GGCGGTAATC
GGCGAATCCG GCTGCGGAAA ATCTGTGCTC TGTCAAAGCA TTTTGAAACT TCTTCCAAAA
AACGGTCACA TCAAATCCGG GAAAATACTC GTAGACGGGA TTGATATCAC CGATTTTAAA
GAAAAAGACA TGAAAAATAT CAGAGGCAAT CTCATCTCGA TGGTTTTCCA GGATCCGCTG
ACCACCTTGA ACCCTACAAT GCCTATTGGA AAACAGATCA CCGAAGCTCT TCTCAAACAC
AAAAAAATCA GCAAAGAAGA AGCAAAAAAG CGTGCGATAG AGATGCTTGA GCTTATTGGA
ATCGATAATC CCGAGCAGAG ATATTCCCTG CAGCCCTATT TCTTTTCCGG AGGCATGCGT
CAGAGATGTG TTCTTGCTAT TGCTCTTGCA TTAGAGCCGA TGATTCTCTT TGCCGATGAA
CCAACAACTG CTCTCGATGT GACCGTCCAG GCAAAAATCA TCGATCTGCT CTTAGACCTT
CGTGACAAAC TCGGATTGTC GATCGTGTTT ATCTCTCACG ATCTGGGGGT TGTCGCACGG
ATTGCAGACC GTGTCGCGAT CATGTATGCA GGCAAAATCG TTGAAATTGG AAATGTTGAT
GAGGTTTTCT ACGATCCAAG ACACCCCTAT ACATGGTGCC TTATGCAGTC GCACCCAACG
CTTGCAAAAG AGGGCGAACC CCTGAAATGT ATCCCGGGAA TACCCCCGAT CATGCTGAAT
CCGCCAAAAG GTGATATGTT TGCCTACAGA AGCAAATACG CAATGAAAAT TGATTTCGAA
AAAATGCCGC CTATGTTTGA GATTTCACCC ACGCATTTTG CTGCGACCTG GCTGCTTGAC
GAACATGCAC CCAAAATCGA TCCGCCGGTC TCTCTGAAGG TCGGGGAGGC ACAGGCAGAA
TGA
 
Protein sequence
MDSILDIEDL SVGFDTQDGE IQAVRGVSFS LKRGEILAVI GESGCGKSVL CQSILKLLPK 
NGHIKSGKIL VDGIDITDFK EKDMKNIRGN LISMVFQDPL TTLNPTMPIG KQITEALLKH
KKISKEEAKK RAIEMLELIG IDNPEQRYSL QPYFFSGGMR QRCVLAIALA LEPMILFADE
PTTALDVTVQ AKIIDLLLDL RDKLGLSIVF ISHDLGVVAR IADRVAIMYA GKIVEIGNVD
EVFYDPRHPY TWCLMQSHPT LAKEGEPLKC IPGIPPIMLN PPKGDMFAYR SKYAMKIDFE
KMPPMFEISP THFAATWLLD EHAPKIDPPV SLKVGEAQAE