Gene Mlab_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0123 
Symbol 
ID4796104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp111901 
End bp112986 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content51% 
IMG OID640098770 
Producthypothetical protein 
Protein accessionYP_001029567 
Protein GI124484951 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCA CCACCATTCT GAATGATGTC CTTGGAGGCT CACGGCTCAC GGAAGATGAA 
GCTGCATTCC TGTTCTCGGT GCAAAACCGG GATATATGGA AGGTTGCCGA GGCCGCCGAT
ATCATTCGCG AACGAAAAAA CGGCGATGTC GTAACATATG TCCGAAACAT GAACATCCAC
ATGACCAACA TCTGCAAAAA CTGTTGCGGG TTATGTGCAT TCGGACGAAA GAGTACCGAT
CCCGAGGCTT TCTGCTTCAC GGATGAAGAG TTCCGGGAGC ATACCAAAGA TGCGGGCAGA
AAAAAGGTCA CCGAGGTCTC GTATCTTTCC GGAATTCACC CGGAATTCAC CATCGAAAGT
TACGAAAAGA TGATCCGGAC ATTCCACGAA GAGATCCCCG GCATCCACGT TCACGGATGC
AGCCCGGATG AGATTTTGTT TGCAGCGAAC CAAAGCGACA TCACAACAAA AGAAGCACTC
ATTCGGCTAA AAGATGCGGG ACTCGGTTCA GTCCAGGGAA CGGCGGCGGA GATTCTCGTC
GACCGTGTTC GAAACATCAT CTGCAGTAAA AAACTCTCCA CGGCAGAGTG GGTCAGGATC
ATCAAAGAAG CCTCGGAAGT TGGATTTCGA GCAACGTCCA CGATCATGTA CGGATCGGTG
GAAACGGAAA AGGAACGGGC ACGCCATCTA TCGGTCCTTC GCGACGTCCA GGACGAAACC
GGTGTATTTA CCGAACTTGT TCCGCTGGCG TTCCTGCACA AAAATACGCC GCTCGAACGG
GCAGGAATCG TAAACCATGA TGCAACAGGA CGCGAAGACA TTCTGCTGAT CGCCATTTCA
CGGCTGTTTT TGGACAACTT CGACAACATC CAGGTACCCT GGTCGAAGAT CGGACGAAAG
GTCACACAGT TGTCCCTGAT GGCGGGAGGA AATGATGTCG GGGGGACGAT GTTTGTGGAC
GCCCTTTCAA AGGATGCCGG CGGCGGAGAT GAATCGGATT ACTTCAGTCC CGAAGACATG
AAAATAATGT GTGACGATAT CGGCAGGACA CTTCGTCAGA GAGACACGTT CTATAATCTC
ATCTGA
 
Protein sequence
MNVTTILNDV LGGSRLTEDE AAFLFSVQNR DIWKVAEAAD IIRERKNGDV VTYVRNMNIH 
MTNICKNCCG LCAFGRKSTD PEAFCFTDEE FREHTKDAGR KKVTEVSYLS GIHPEFTIES
YEKMIRTFHE EIPGIHVHGC SPDEILFAAN QSDITTKEAL IRLKDAGLGS VQGTAAEILV
DRVRNIICSK KLSTAEWVRI IKEASEVGFR ATSTIMYGSV ETEKERARHL SVLRDVQDET
GVFTELVPLA FLHKNTPLER AGIVNHDATG REDILLIAIS RLFLDNFDNI QVPWSKIGRK
VTQLSLMAGG NDVGGTMFVD ALSKDAGGGD ESDYFSPEDM KIMCDDIGRT LRQRDTFYNL
I