Gene Mlab_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0093 
Symbol 
ID4794715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp90839 
End bp91558 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID640098739 
Product30S ribosomal protein S4e 
Protein accessionYP_001029537 
Protein GI124484921 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1471] Ribosomal protein S4E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.507041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAA CCAAGAGAAT GACTGCACCG GATGCATGGC AGATCGCCAG AAAAGAAAGC 
AAATATGTCG TCAGCACCTC AAGCGGTCCG CACGATGGTT CAGCTCTTCC AATCGGCATC
TGGCTCCGCG ACCACATGCA GTTTGCATTA AACACCAAAG AAGTCAGAAA GATTCTGCAC
GACCGTCAGG TTTTACTGAA TGGTCATATC GTAACCGATG AACACATCGG AATCGATGTC
TTTGATATCA TCAGCTTCCC GAAAATCGAC AAGCACTACA TGATCCTTGT CGATGAGAAG
GGACGCCACA ATGAATATGA GATCTCCGCA GATGCAGCCA AACTCCAGCT CGTAAAAGTT
GCAAACAAAA CCACCATTAA AGGCGGCAAG ACACAGATCA ACTTAACCAG CGGTGCAAAC
TTCATCGGTG AAGAAAACTG TAAAGGCAAA GATTCTCTCG TTATCGGCAT CGCCGGCGAC
GACCGTTTCG CAGTCCAGCA GCACTTCCCG TATGCAGTCG GCAACATGGC AATCATCATC
GGCGGACAGC ACACAATGAA GACCGGAAAA CTCGTGGAGA TCCTTGTTCA GGAATCATCT
CTGCCGAACC GTGTCATCAT TGAAGATGCC GACGGAAACA AGTTCGAGAC CATTGAAGAC
TATGTCTACA TGATCGGAAC CACCGAGTCC TTCCTCAAAA CCTGGGGTGT TGACGCATGA
 
Protein sequence
MTRTKRMTAP DAWQIARKES KYVVSTSSGP HDGSALPIGI WLRDHMQFAL NTKEVRKILH 
DRQVLLNGHI VTDEHIGIDV FDIISFPKID KHYMILVDEK GRHNEYEISA DAAKLQLVKV
ANKTTIKGGK TQINLTSGAN FIGEENCKGK DSLVIGIAGD DRFAVQQHFP YAVGNMAIII
GGQHTMKTGK LVEILVQESS LPNRVIIEDA DGNKFETIED YVYMIGTTES FLKTWGVDA