| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0086 |
|---|
| Symbol | rpl22p |
|---|
| ID | 4795567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 88052 |
|---|
| End bp | 88525 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640098733 |
|---|
| Product | 50S ribosomal protein L22P |
|---|
| Protein accession | YP_001029531 |
|---|
| Protein GI | 124484915 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.438509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAA CAGAATACAG TAACAAACTT ACCGGCGACA ACATCGCCCG TGCCAAGGCT
AACGAACTCG GCTGCTCTCC AAAGCACGCT GTGGAAATCG CCCACCTTGT CCGCAATATG
ATGGCAGACG ACGCAGTTGC ATACCTTGAA CAGGTCATCG ACCTCAAGCG TGCAGTTCCG
TTCCACCGTT TCAACAGAAA CGTAAGCCAC CAGAAGAGCT TAAACGGTAA GACCTTCGGA
ACCGCAGCCG GCAGATACCC GGTCAAGGCC GCCGCCGAGT ATGTCCGTTT AATCCGCTCT
GCACAGAAGA ACGCTGAATA CGCAGGTCTC GCACCGGAAA AGATGGTCAT CATCCACGCC
GCTGCAAACA AGGGACGCTG CATCAAAGGA ATCTTCCCCC GTGCAATGGG TAGAGCTACC
CCTAAGCATA AAGATTCCGT CAACGTTGAA ATCATCCTCC GTGAGGTACA GTAA
|
|---|
| Protein sequence | MARTEYSNKL TGDNIARAKA NELGCSPKHA VEIAHLVRNM MADDAVAYLE QVIDLKRAVP
FHRFNRNVSH QKSLNGKTFG TAAGRYPVKA AAEYVRLIRS AQKNAEYAGL APEKMVIIHA
AANKGRCIKG IFPRAMGRAT PKHKDSVNVE IILREVQ
|
|---|
| |