| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0080 |
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| Symbol | tfx |
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| ID | 4794756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanocorpusculum labreanum Z |
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| Kingdom | Archaea |
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| Replicon accession | NC_008942 |
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| Strand | + |
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| Start bp | 83722 |
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| End bp | 84126 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640098727 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001029525 |
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| Protein GI | 124484909 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1356] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | [TIGR00721] DNA-binding protein, Tfx family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0969953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGATA CACTCCTTAC TGACCGTCAG AAGGAAGTCA TACGATTCCG GAAACAGGGT
ATGACGCAGC AGCAGATTGC TGACCGACTT GGCACATCCA AGGCTAATAT TTGTACTATT
GAAAAATCTG CCAATGAAAA TATTCGGCGG GCGAAAGAAA CTCTCGAGTT TTTGTACACC
CTTGATGCAA CCGAGTTGTG CGTCCTTCCC GAAGGAACCG ATTTAATGGA GGCCCCAAAG
ATAATTTATG TCTCGGCGGC ACCGCTCAAC ATTAAGATCA GGTATGATAC GCTTGCCTTG
ATCAATCGTA TATCTTCGTA TATGCCTGAG AAGATCAAAG GCCGGCATGT GAAAGAGGAT
ATCATCGTTT ATCTGAATAA TGACGGTGAT CTGTATTTTG GATGA
|
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| Protein sequence | MKDTLLTDRQ KEVIRFRKQG MTQQQIADRL GTSKANICTI EKSANENIRR AKETLEFLYT
LDATELCVLP EGTDLMEAPK IIYVSAAPLN IKIRYDTLAL INRISSYMPE KIKGRHVKED
IIVYLNNDGD LYFG
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