Gene Mlab_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0045 
Symbol 
ID4796077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp48061 
End bp48684 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content53% 
IMG OID640098690 
Producthypothetical protein 
Protein accessionYP_001029490 
Protein GI124484874 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.372013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTT TAGAAGCCGA TCATATTTCA AAATCATATG GGAAGTTTGC GGCACTAAAC 
GATCTCTCTA TGGAGATCGC GGCCGGCGAG ACCGTCGGGC TTACCGGTCT TTCGGGATCC
GGAAAAAGTA CCTGTGCCAG GATCCTTGCA GGACTCGAAC GCCCAAATAC CGGTTTCGTG
AAATATGCCG GAAAAGAACT GACCGGTCCC ACCCCAGAGA TCCAGATGAT CTTTCAGGAT
CCGGCTGGGT CCTTCAACCC GGTTCGAACG ATCTATCAGT CGTTATCTTC CGTGCTGAGT
CTGCAGGGTG TACCTAAATC AAAGCGCCGC GATCTTCTTT CGGAGCATTT CCAGAATGCC
GGGCTGCAGA CCGAAATTTT ATCCCGCTAT CCCGACCAGA TCTCTGGAGG GCAGGCTCAG
AGGGTCGCGA TCGTCCGGGG CATGCTCGTT CACCCGAAGG TGATGATTCT GGACGAACCA
ACCTCGGCGC TCGATGTCTC GGTCCAGGCC CAGATCCTGC ACCTGCTTAA AAAAATCCAG
AAGGAAAACG GCATATCCTA CGTGTTTATC TCGCACGATC CGTCGGTTGT TGAATTCATG
GCGGACCGGG TGATCCACCT GTGA
 
Protein sequence
MLILEADHIS KSYGKFAALN DLSMEIAAGE TVGLTGLSGS GKSTCARILA GLERPNTGFV 
KYAGKELTGP TPEIQMIFQD PAGSFNPVRT IYQSLSSVLS LQGVPKSKRR DLLSEHFQNA
GLQTEILSRY PDQISGGQAQ RVAIVRGMLV HPKVMILDEP TSALDVSVQA QILHLLKKIQ
KENGISYVFI SHDPSVVEFM ADRVIHL