Gene Mlab_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0018 
Symbol 
ID4794768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp19260 
End bp20195 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content52% 
IMG OID640098663 
ProductGTP cyclohydrolase 
Protein accessionYP_001029463 
Protein GI124484847 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00294] conserved hypothetical protein TIGR00294 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAC CAGATGTGCA GTCCACCGCC CCGGATGTGA GAATCAGCCT AACGCGTGTT 
GGTGTGAAAA ATGTCAGAAA ACTTGTCGAG GTCGGCAGAC CCGGAAAGAC CCGGCCGGCG
ATCTTTATAT CAGAGTTTGA TGTATTCGTT GATCTTCCAA GCAGTCTGAA AGGAGCAAAT
CTTTCCAGAA ACTTCGAAGT GATCGACGAG GTGCTCCAGC AGGCAACGAG CGGTGATGTC
AAAGGTATTG AGGATGTGTG CGGGATCGTT TCACGAAAAC TTCTCGACCA TCATGAATAT
GCTGACCGCA CGGAAGTTTT TATGAGAAGT TTCTACATGA TGAACCGGGA GACACCCGTC
TCGAAGACGT CATGTCAGGA AGTCATCAAT GTCTACGCAC ATGCGGTAGC CCAGAGAACG
AACGGCAAAC CGATGGTCAG GAAAAGTGTC GGAGCTGAAG TTACCGGTAT CACCGCATGT
CCGTGCGCTC AAAACATCAT GAAGGATCAC GCGATGCATG TGATGGAACA ACTCGAGATT
CCCGAGGATA AGATCTCGGC ATTCTTCAAC GAGATCCCGA TGGCAAGCCA CAACCAGCGC
GGACGCGGCT TCCTCTGTGT TGAGACGGAC GGCGATATCA TCGTCCCGCT CGAAAAGATC
GTAACGGTTC TCAAAGAATC GATGAGCGCA AAGATCTACG AACTCCTGAA GCGCGGCGAT
GAGAGCTATG TCGTGATGGC GGCCCACAAG AACGCCAGAT TCGTCGAAGA CTGTGTTCGC
GAGATGGCAC GCAGAGTGGT CTCCACATTT GGTGACCTTC CTGGGGACAC CCACATCACG
ATCCGGCAGA CCAATGAGGA AAGCATCCAT CAGCATGACG CTTACGCGGA GAGAAAGGCA
ACCCTTGCCG AACTTCGCGA TGAGCTCAGC ATATAA
 
Protein sequence
MSLPDVQSTA PDVRISLTRV GVKNVRKLVE VGRPGKTRPA IFISEFDVFV DLPSSLKGAN 
LSRNFEVIDE VLQQATSGDV KGIEDVCGIV SRKLLDHHEY ADRTEVFMRS FYMMNRETPV
SKTSCQEVIN VYAHAVAQRT NGKPMVRKSV GAEVTGITAC PCAQNIMKDH AMHVMEQLEI
PEDKISAFFN EIPMASHNQR GRGFLCVETD GDIIVPLEKI VTVLKESMSA KIYELLKRGD
ESYVVMAAHK NARFVEDCVR EMARRVVSTF GDLPGDTHIT IRQTNEESIH QHDAYAERKA
TLAELRDELS I