Gene Mlab_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0001 
Symbol 
ID4795583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp531 
End bp1808 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content50% 
IMG OID640098646 
ProductORC complex protein Cdc6/Orc1 
Protein accessionYP_001029446 
Protein GI124484830 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID[TIGR02928] orc1/cdc6 family replication initiation protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGCG AACCCTACAA ATCTACCGGT CTCTTTAAAA AATATATCAA TCCTAACAAA 
ATTTTTCAAA ATCGCGAGGT TTTAAGGCAT AGTTACAGCC CAAAAGAACT CCCGCATCGT
ATGGATCAGA TCGATTCCAT CGCAGAGATC CTCGCTCCGG CACTTCAGGG AGCAACTCCT
TCGAACATTC TCATTTACGG AAAAACCGGA ACCGGCAAAA CTGCAACGGT CAAGTTTGTC
GGCACCGAAC TCGAAAACGA AAGCTCGGAG TTCTCTCCAT GCAGACTTGT CCATCTCAAC
TGCGAGACCA TCGATACCCA GTACCGCGTC CTTGCCCAGA TCGCAAACCA TGTCAGCGGT
CATGATCTGA AAGCAAGCGA CAAAATCAAA AACACCATCC CGGCAACCGG ATGGCACACC
GATCAGGTGT ACTCGGAACT CAAGAACGTT CTGGAACAGG CAGGCGGTCT CCAGATCATC
GTTCTGGACG AAATCGACAA GCTGGTCAAA AAAAGCGGAG ATGACACACT CTATAATTTA
ACGCGCATCA ACAGTGACCT CTTTTCGTCA CGCGTCTGTA TTATAGGCAT CTCGAACGAT
CTGACATTCA AGGACTTTCT CGATCCGCGT GTCTTATCTT CCCTCTCAGA GGAAGAGCTT
GTTTTCCCGC CGTACAACGC GGATCAGCTC AGGGACATCC TTCATCAGCG GGCCGAGATG
GCCTTTTTCC CGGACGTCGT TTCCGATGAA GTGATCGGTC TTTGTGCCGC ACGTGCAGCT
CAGGAACACG GCGACGCACG CAGAGCGCTC GATCTCTTAC GCGTCTCCGG CGAACTTGCC
GAACGCGAAG GCGCCGAGCA CGTCATGGTA AAGCATGTCA ACAGCGCTCA GGAAAATATC
GAAACCGATA CGATGAGCGA ATGCGTAAAA ACCCTTCCCT CACAGAGTAA GATCGTTCTC
TGCTCCATGC TCCTCATGGC CGCTTCCGGC CAGAAAGTGT TCACAAGCGG CTCGGTCATC
AACGTATACC GCGAAGTTGC GGCCGAACTC GACACCGAAG CGCTGAGCCA CCGCCGCGTT
TCCGATCTCA TCAACGAACT CAACATGCTT GGAATCATCA CGACCCGTGT CGTTTCCCAT
GGAAGGCACG GCCGGACGAC AGAAATTTAT TTTAAGAGTC CGACCAATGA CATACGTACT
GTGATCATGA ATGATTCACG GTTTCAGGAA TGCGGTATTC TGCATCCTCT GTTGAAAAGT
CATGAAAAAG GTGATTAA
 
Protein sequence
MDSEPYKSTG LFKKYINPNK IFQNREVLRH SYSPKELPHR MDQIDSIAEI LAPALQGATP 
SNILIYGKTG TGKTATVKFV GTELENESSE FSPCRLVHLN CETIDTQYRV LAQIANHVSG
HDLKASDKIK NTIPATGWHT DQVYSELKNV LEQAGGLQII VLDEIDKLVK KSGDDTLYNL
TRINSDLFSS RVCIIGISND LTFKDFLDPR VLSSLSEEEL VFPPYNADQL RDILHQRAEM
AFFPDVVSDE VIGLCAARAA QEHGDARRAL DLLRVSGELA EREGAEHVMV KHVNSAQENI
ETDTMSECVK TLPSQSKIVL CSMLLMAASG QKVFTSGSVI NVYREVAAEL DTEALSHRRV
SDLINELNML GIITTRVVSH GRHGRTTEIY FKSPTNDIRT VIMNDSRFQE CGILHPLLKS
HEKGD